Mascot Search Results

User            : mascot-training
Email           : [email protected]
Search title    : Exercise PMF4
Database        : SwissProt 56.0 (392667 sequences; 141217034 residues)
Taxonomy        : Saccharomyces Cerevisiae (baker's yeast) (6732 sequences)
Timestamp       : 11 Aug 2008 at 10:01:54 GMT
Top Score       : 157 for Mixture 1, CDC48_YEAST + NPL4_YEAST

Mascot Score Histogram

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 51 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    Mixture 1    Total score: 157    Expect: 1.3e-012  Matches: 19
 Components (only one family member shown for each component):
      CDC48_YEAST    Mass: 91939    Score: 82     Expect: 4.1e-005  Matches: 11
 Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3
      NPL4_YEAST    Mass: 65740    Score: 64     Expect: 0.0025  Matches: 8
 Nuclear protein localization protein 4 OS=Saccharomyces cerevisiae GN=NPL4 PE=1 SV=1

2.    CDC48_YEAST    Mass: 91939    Score: 82     Expect: 4.1e-005  Matches: 11
 Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3
3.    NPL4_YEAST    Mass: 65740    Score: 64     Expect: 0.0025  Matches: 8
 Nuclear protein localization protein 4 OS=Saccharomyces cerevisiae GN=NPL4 PE=1 SV=1
      MDV1_YEAS7    Mass: 80009    Score: 20     Expect: 72  Matches: 4
 Mitochondrial division protein 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=MDV1 PE=3 SV=1
      MDV1_YEAST    Mass: 79983    Score: 20     Expect: 72  Matches: 4
 Mitochondrial division protein 1 OS=Saccharomyces cerevisiae GN=MDV1 PE=1 SV=1
      DYN3_YEAST    Mass: 36801    Score: 20     Expect: 72  Matches: 3
 Cytoplasmic dynein intermediate light chain DYN3 OS=Saccharomyces cerevisiae GN=DYN3 PE=1 SV=2
4.    JAC1_YEAST    Mass: 21764    Score: 34     Expect: 2.6  Matches: 4
 J-type co-chaperone JAC1, mitochondrial OS=Saccharomyces cerevisiae GN=JAC1 PE=1 SV=1

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 100 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 32

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