Mascot Search Results

User            : 
Email           : 
Search title    : Peptide Mass Fingerprint Example
Database        : SwissProt 51.6 (257964 sequences; 93947433 residues)
Timestamp       : 19 Feb 2007 at 14:08:10 GMT
Top Score       : 194 for PML_HUMAN, Probable transcription factor PML (Tripartite motif-containing protein 19) (RING finger protein 71)

Mascot Score Histogram

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 67 are significant (p<0.05).

Score Distribution

1.     PML_HUMAN    Mass: 97455    Score: 194    Expect: 1e-014  Matches: 15

Probable transcription factor PML (Tripartite motif-containing protein 19) (RING finger protein 71)

       MURC_IDILO    Mass: 52994    Score: 51     Expect: 2  Matches: 5

UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase) - I

       DPO1_RICHE    Mass: 104386   Score: 50     Expect: 2.8  Matches: 6

DNA polymerase I (EC 2.7.7.7) (POL I) - Rickettsia helvetica

       THIO_PONPY    Mass: 11877    Score: 41     Expect: 20  Matches: 3

Thioredoxin (Trx) - Pongo pygmaeus (Orangutan)

       RBL2_RHOS4    Mass: 50569    Score: 40     Expect: 28  Matches: 4

Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO) - Rhodobacter sphaeroides (strain ATCC 17

       RBL2_RHOSH    Mass: 50487    Score: 40     Expect: 28  Matches: 4

Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO) - Rhodobacter sphaeroides (Rhodopseudomon

       GPA1_YEAST    Mass: 54042    Score: 40     Expect: 29  Matches: 4

Guanine nucleotide-binding protein alpha-1 subunit (GP1-alpha) - Saccharomyces cerevisiae (Baker's

       BNA4_YEAST    Mass: 52396    Score: 39     Expect: 36  Matches: 4

Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine 3-hydroxylase) (Biosynthesis of nicotinic aci

       SWR1_DEBHA    Mass: 184594   Score: 38     Expect: 45  Matches: 6

Helicase SWR1 (EC 3.6.1.-) - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)

       IFNW1_HUMAN    Mass: 22304    Score: 36     Expect: 69  Matches: 3

Interferon omega-1 precursor (Interferon alpha-II-1) - Homo sapiens (Human)

       RS4_THEFY    Mass: 23321    Score: 34     Expect: 1.1e+002  Matches: 3

30S ribosomal protein S4 - Thermobifida fusca (strain YX)

       RS4_NITOC    Mass: 23814    Score: 33     Expect: 1.2e+002  Matches: 3

30S ribosomal protein S4 - Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)

       MRPC_BACPF    Mass: 12183    Score: 33     Expect: 1.3e+002  Matches: 2

Na(+)/H(+) antiporter subunit C (Multiple resistance and pH homeostasis protein C) (Mrp complex sub

       RL3_HUMAN    Mass: 46080    Score: 33     Expect: 1.3e+002  Matches: 3

60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B) (TARBP-B) - Homo sapiens (Human)

       RL3_RAT    Mass: 46107    Score: 33     Expect: 1.3e+002  Matches: 3

60S ribosomal protein L3 (L4) - Rattus norvegicus (Rat)

       RL10_GLOVI    Mass: 20830    Score: 33     Expect: 1.4e+002  Matches: 3

50S ribosomal protein L10 - Gloeobacter violaceus

       HLF_HUMAN    Mass: 33178    Score: 33     Expect: 1.4e+002  Matches: 3

Hepatic leukemia factor - Homo sapiens (Human)

       ISPDF_CAMJE    Mass: 41664    Score: 32     Expect: 1.6e+002  Matches: 4

IspD/ispF bifunctional enzyme [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (

       ISPDF_CAMJR    Mass: 41663    Score: 32     Expect: 1.6e+002  Matches: 4

IspD/ispF bifunctional enzyme [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (

       CAB2_ECHGR    Mass: 7599     Score: 32     Expect: 1.6e+002  Matches: 2

Calcium-binding protein 2 (Calcium-binding protein II) (CaBP-II) (EgCaBPII) - Echinococcus granulos

       GLGA_PSEF5    Mass: 53140    Score: 32     Expect: 1.6e+002  Matches: 4

Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase) - Pseudomonas fluorescens (s

       MRN2_MEGVI    Mass: 6947     Score: 32     Expect: 1.7e+002  Matches: 2

Megourin-2 - Megoura viciae (Vetch aphid)

       MRN3_MEGVI    Mass: 6947     Score: 32     Expect: 1.7e+002  Matches: 2

Megourin-3 - Megoura viciae (Vetch aphid)

       SYK_PICTO    Mass: 57967    Score: 32     Expect: 1.7e+002  Matches: 4

Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Picrophilus torridus

       TRME_LACPL    Mass: 51004    Score: 32     Expect: 1.8e+002  Matches: 3

tRNA modification GTPase trmE - Lactobacillus plantarum

       SYNJ1_BOVIN    Mass: 146492   Score: 31     Expect: 1.9e+002  Matches: 5

Synaptojanin-1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragme

       T2A1_ACICA    Mass: 42469    Score: 31     Expect: 1.9e+002  Matches: 4

Type-2 restriction enzyme AccI (EC 3.1.21.4) (Type II restriction enzyme AccI) (Endonuclease AccI)

       CXO6_CONST    Mass: 8346     Score: 31     Expect: 2e+002  Matches: 2

Conotoxin-6 precursor - Conus striatus (Striated cone)

       ANTA_HAEOF    Mass: 15214    Score: 31     Expect: 2e+002  Matches: 3

Antistasin precursor (ATS) (Blood coagulation factor Xa/proclotting enzyme inhibitor) - Haementeria

       RL11_PELLD    Mass: 15044    Score: 31     Expect: 2e+002  Matches: 3

50S ribosomal protein L11 - Pelodictyon luteolum (strain DSM 273) (Chlorobium luteolum (strain DSM

       RRF_MYCGA    Mass: 21131    Score: 31     Expect: 2.1e+002  Matches: 3

Ribosome recycling factor (Ribosome-releasing factor) (RRF) - Mycoplasma gallisepticum

       BZW2_CHICK    Mass: 47812    Score: 31     Expect: 2.2e+002  Matches: 3

Basic leucine zipper and W2 domain-containing protein 2 - Gallus gallus (Chicken)

       DNAK_ZYMMO    Mass: 68451    Score: 30     Expect: 2.4e+002  Matches: 4

Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) - Zymomonas mobi

       YD59_SCHPO    Mass: 37924    Score: 30     Expect: 2.4e+002  Matches: 3

Hypothetical protein C6C3.09 in chromosome I - Schizosaccharomyces pombe (Fission yeast)

       Y318_RICPR    Mass: 13642    Score: 30     Expect: 2.5e+002  Matches: 2

Hypothetical protein RP318 - Rickettsia prowazekii

       DNAK_FRATT    Mass: 69212    Score: 30     Expect: 2.6e+002  Matches: 4

Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) - Francisella tu

       DNAK_FRATU    Mass: 69166    Score: 30     Expect: 2.6e+002  Matches: 4

Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) - Francisella tu

       QUEF_CHRSD    Mass: 31366    Score: 30     Expect: 2.6e+002  Matches: 3

NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.-) (NADPH-dependent nitrile oxidoreducta

`2.`	`PTXR_PSEAE Mass: 34971 Score: 41 Expect: 21 Matches: 4`
	`HTH-type transcriptional regulator ptxR - Pseudomonas aeruginosa`

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 0.2 Da
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 18

Mascot: http://www.matrixscience.com/

`1.`	`PML_HUMAN Mass: 97455 Score: 194 Expect: 1e-014 Matches: 15`
	`Probable transcription factor PML (Tripartite motif-containing protein 19) (RING finger protein 71)`

	`MURC_IDILO Mass: 52994 Score: 51 Expect: 2 Matches: 5`
	`UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase) - I`

	`DPO1_RICHE Mass: 104386 Score: 50 Expect: 2.8 Matches: 6`
	`DNA polymerase I (EC 2.7.7.7) (POL I) - Rickettsia helvetica`

	`THIO_PONPY Mass: 11877 Score: 41 Expect: 20 Matches: 3`
	`Thioredoxin (Trx) - Pongo pygmaeus (Orangutan)`

	`RBL2_RHOS4 Mass: 50569 Score: 40 Expect: 28 Matches: 4`
	`Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO) - Rhodobacter sphaeroides (strain ATCC 17`

	`RBL2_RHOSH Mass: 50487 Score: 40 Expect: 28 Matches: 4`
	`Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO) - Rhodobacter sphaeroides (Rhodopseudomon`

	`GPA1_YEAST Mass: 54042 Score: 40 Expect: 29 Matches: 4`
	`Guanine nucleotide-binding protein alpha-1 subunit (GP1-alpha) - Saccharomyces cerevisiae (Baker's`

	`BNA4_YEAST Mass: 52396 Score: 39 Expect: 36 Matches: 4`
	`Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine 3-hydroxylase) (Biosynthesis of nicotinic aci`

	`SWR1_DEBHA Mass: 184594 Score: 38 Expect: 45 Matches: 6`
	`Helicase SWR1 (EC 3.6.1.-) - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)`

	`IFNW1_HUMAN Mass: 22304 Score: 36 Expect: 69 Matches: 3`
	`Interferon omega-1 precursor (Interferon alpha-II-1) - Homo sapiens (Human)`

		Help
	Significance threshold p<	Max. number of hits

	`RS4_THEFY Mass: 23321 Score: 34 Expect: 1.1e+002 Matches: 3`
	`30S ribosomal protein S4 - Thermobifida fusca (strain YX)`

	`RS4_NITOC Mass: 23814 Score: 33 Expect: 1.2e+002 Matches: 3`
	`30S ribosomal protein S4 - Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)`

	`MRPC_BACPF Mass: 12183 Score: 33 Expect: 1.3e+002 Matches: 2`
	`Na(+)/H(+) antiporter subunit C (Multiple resistance and pH homeostasis protein C) (Mrp complex sub`

	`RL3_HUMAN Mass: 46080 Score: 33 Expect: 1.3e+002 Matches: 3`
	`60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B) (TARBP-B) - Homo sapiens (Human)`

	`RL3_RAT Mass: 46107 Score: 33 Expect: 1.3e+002 Matches: 3`
	`60S ribosomal protein L3 (L4) - Rattus norvegicus (Rat)`

	`RL10_GLOVI Mass: 20830 Score: 33 Expect: 1.4e+002 Matches: 3`
	`50S ribosomal protein L10 - Gloeobacter violaceus`

	`HLF_HUMAN Mass: 33178 Score: 33 Expect: 1.4e+002 Matches: 3`
	`Hepatic leukemia factor - Homo sapiens (Human)`

	`ISPDF_CAMJE Mass: 41664 Score: 32 Expect: 1.6e+002 Matches: 4`
	`IspD/ispF bifunctional enzyme [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (`

	`ISPDF_CAMJR Mass: 41663 Score: 32 Expect: 1.6e+002 Matches: 4`
	`IspD/ispF bifunctional enzyme [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (`

	`CAB2_ECHGR Mass: 7599 Score: 32 Expect: 1.6e+002 Matches: 2`
	`Calcium-binding protein 2 (Calcium-binding protein II) (CaBP-II) (EgCaBPII) - Echinococcus granulos`

Mascot Search Results

Mascot Score Histogram

Concise Protein Summary Report

Search Parameters

	`GLGA_PSEF5 Mass: 53140 Score: 32 Expect: 1.6e+002 Matches: 4`
	`Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase) - Pseudomonas fluorescens (s`

	`MRN2_MEGVI Mass: 6947 Score: 32 Expect: 1.7e+002 Matches: 2`
	`Megourin-2 - Megoura viciae (Vetch aphid)`

	`MRN3_MEGVI Mass: 6947 Score: 32 Expect: 1.7e+002 Matches: 2`
	`Megourin-3 - Megoura viciae (Vetch aphid)`

	`SYK_PICTO Mass: 57967 Score: 32 Expect: 1.7e+002 Matches: 4`
	`Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Picrophilus torridus`

	`TRME_LACPL Mass: 51004 Score: 32 Expect: 1.8e+002 Matches: 3`
	`tRNA modification GTPase trmE - Lactobacillus plantarum`

	`SYNJ1_BOVIN Mass: 146492 Score: 31 Expect: 1.9e+002 Matches: 5`
	`Synaptojanin-1 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragme`

	`T2A1_ACICA Mass: 42469 Score: 31 Expect: 1.9e+002 Matches: 4`
	`Type-2 restriction enzyme AccI (EC 3.1.21.4) (Type II restriction enzyme AccI) (Endonuclease AccI)`

	`CXO6_CONST Mass: 8346 Score: 31 Expect: 2e+002 Matches: 2`
	`Conotoxin-6 precursor - Conus striatus (Striated cone)`

	`ANTA_HAEOF Mass: 15214 Score: 31 Expect: 2e+002 Matches: 3`
	`Antistasin precursor (ATS) (Blood coagulation factor Xa/proclotting enzyme inhibitor) - Haementeria`

	`RL11_PELLD Mass: 15044 Score: 31 Expect: 2e+002 Matches: 3`
	`50S ribosomal protein L11 - Pelodictyon luteolum (strain DSM 273) (Chlorobium luteolum (strain DSM`