Mascot
>
Set Search Defaults
Set Mascot search form defaults
Database
SwissProt
Ecoli-MetEng
S-cerevisiae-S288C
A-niger-ATCC1015
B-subtilis-168
Strep-coelicolor
Strep-rapamycinicus
P-putida
Strep-venezuelae
Y-lipoytica
Rhodo-toruloides
A.tumefaciens
C.glutamicum
Ralstonia-eutropha
Pichia-pastoris
P_taiwanensis
P.fluorescens-F113
B-thetaiotaomicron
A_Pseudoterrus
Streptomyces-albus
P-putida-MT2
Xanthomonas_oryzae
Strep-lividans
Pichia-kudriavzevii
Strep-albireticuli
Singer-community
M-smegmatis
A-oryzae
Z-mays
Enigma-mix-Oct2020
P-denitrificans
Strep-noursei
Neurospora-crassa
UW-syncom
Ecoli-PKS
P-putida-BP8
P-putida-BP6
P-putida-M2
Test
KrisHunt-SynCom
R.sphaeroides
Seaweed-digest
B-licheniformis
P-putida-PKS
Cglu-SCgG1
N-benthamiana
B-distachyon
Rice-peptide
K-marxianus
CHO
Taxonomy
All entries
. . Archaea (Archaeobacteria)
. . Eukaryota (eucaryotes)
. . . . Alveolata (alveolates)
. . . . . . Plasmodium falciparum (malaria parasite)
. . . . . . Other Alveolata
. . . . Metazoa (Animals)
. . . . . . Caenorhabditis elegans
. . . . . . Drosophila (fruit flies)
. . . . . . Chordata (vertebrates and relatives)
. . . . . . . . bony vertebrates
. . . . . . . . . . lobe-finned fish and tetrapod clade
. . . . . . . . . . . . Mammalia (mammals)
. . . . . . . . . . . . . . Primates
. . . . . . . . . . . . . . . . Homo sapiens (human)
. . . . . . . . . . . . . . . . Other primates
. . . . . . . . . . . . . . Rodentia (Rodents)
. . . . . . . . . . . . . . . . Mus.
. . . . . . . . . . . . . . . . . . Mus musculus (house mouse)
. . . . . . . . . . . . . . . . Rattus
. . . . . . . . . . . . . . . . Other rodentia
. . . . . . . . . . . . . . Other mammalia
. . . . . . . . . . . . Xenopus laevis (African clawed frog)
. . . . . . . . . . . . Other lobe-finned fish and tetrapod clade
. . . . . . . . . . Actinopterygii (ray-finned fishes)
. . . . . . . . . . . . Takifugu rubripes (Japanese Pufferfish)
. . . . . . . . . . . . Danio rerio (zebra fish)
. . . . . . . . . . . . Other Actinopterygii
. . . . . . . . Other Chordata
. . . . . . Other Metazoa
. . . . Dictyostelium discoideum
. . . . Fungi
. . . . . . Saccharomyces Cerevisiae (baker's yeast)
. . . . . . Schizosaccharomyces pombe (fission yeast)
. . . . . . Pneumocystis carinii
. . . . . . Other Fungi
. . . . Viridiplantae (Green Plants)
. . . . . . Arabidopsis thaliana (thale cress)
. . . . . . Oryza sativa (rice)
. . . . . . Other green plants
. . . . Other Eukaryota
. . Bacteria (Eubacteria)
. . . . Actinobacteria (class)
. . . . . . Mycobacterium tuberculosis complex
. . . . . . Other Actinobacteria (class)
. . . . Firmicutes (gram-positive bacteria)
. . . . . . Bacillus subtilis
. . . . . . Mycoplasma
. . . . . . Streptococcus Pneumoniae
. . . . . . Streptomyces coelicolor
. . . . . . Other Firmicutes
. . . . Proteobacteria (purple bacteria)
. . . . . . Agrobacterium tumefaciens
. . . . . . Campylobacter jejuni
. . . . . . Escherichia coli
. . . . . . Neisseria meningitidis
. . . . . . Salmonella
. . . . . . Other Proteobacteria
. . . . Other Bacteria
. . Viruses
. . . . Hepatitis C virus
. . . . Other viruses
. . Other (includes plasmids and artificial sequences)
. . unclassified
. . Species information unavailable
Enzyme
Trypsin
Trypsin/P
Arg-C
Asp-N
Asp-N_ambic
Chymotrypsin
CNBr
CNBr+Trypsin
Formic_acid
Lys-C
Lys-C/P
LysC+AspN
Lys-N
PepsinA
semiTrypsin
TrypChymo
TrypsinMSIPI
TrypsinMSIPI/P
V8-DE
V8-E
None
Glu_C
GluC_Trypsin
Allow up to
0
1
2
3
4
5
6
7
8
9
missed cleavages
Fixed
modifications
Variable
modifications
Show all mods.
Quantitation
None
iTRAQ 4plex
iTRAQ 8plex
TMT 6plex
TMT 2plex
18O multiplex
SILAC K+6 R+6 multiplex
IPTL (Succinyl and IMID) multiplex
ICPL duplex pre-digest [MD]
ICPL duplex post-digest [MD]
ICPL triplex pre-digest [MD]
18O corrected [MD]
15N Metabolic [MD]
15N + 13C Metabolic [MD]
SILAC K+6 R+10 [MD]
SILAC K+6 R+10 Arg-Pro [MD]
SILAC K+6 R+6 [MD]
SILAC R+6 R+10 [MD]
SILAC K+8 R+10 [MD]
SILAC K+4 K+8 R+6 R+10 [MD]
ICAT ABI Cleavable [MD]
ICAT D8 [MD]
Dimethylation [MD]
NBS Shimadzu [MD]
Label-free [MD]
Average [MD]
Peptide tol. ±
Da
mmu
%
ppm
#
13
C
0
1
2
MS/MS tol. ±
Da
mmu
Peptide charge
8-
7-
6-
5-
4-
3-
2-, 3- and 4-
2- and 3-
2-
1-, 2- and 3-
1-
Mr
1+
1+, 2+ and 3+
2+
2+ and 3+
2+, 3+ and 4+
3+
4+
5+
6+
7+
8+
Monoisotopic
Average
Data format
Mascot generic
Sequest (.DTA)
Finnigan (.ASC)
Micromass (.PKL)
PerSeptive (.PKS)
Sciex API III
Bruker (.XML)
mzData (.XML)
mzML (.mzML)
(MS/MS only)
Instrument
Default
ESI-QUAD-TOF
MALDI-TOF-PSD
ESI-TRAP
ESI-QUAD
ESI-FTICR
MALDI-TOF-TOF
ESI-4SECTOR
FTMS-ECD
ETD-TRAP
MALDI-QUAD-TOF
MALDI-QIT-TOF
MALDI-ISD
CID+ETD
(MS/MS only)
Decoy
Error tolerant
Report top
AUTO
5
10
20
30
50
100
200
hits
Copyright © 2008
Matrix Science Ltd.
All Rights Reserved.