MASCOT Search ResultsMASCOT Search Results| User | : | |
|---|---|---|
| : | ||
| Search title | : | iPRG2008 SwissProt Mouse |
| MS data file | : | D:\iPRG2008\mgf\merged.mgf |
| Databases | : | 1: cRAP 20090731 (111 sequences; 37,180 residues) 2: SwissProt 57.14 (514,789 sequences; 181,163,771 residues) |
| Taxonomy | : | 1: (none) 2: Mus. (16,273 sequences) |
| Timestamp | : | 5 Mar 2010 at 14:04:48 GMT |
| Warning | : | No taxonomy indexes for cRAP, taxonomy 'Mus.' ignored. Searching all entries in cRAP |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | Trypsin/P |
| Fixed modifications | : | iTRAQ4plex (K), iTRAQ4plex (N-term), Methylthio (C) |
| Variable modifications | : | Acetyl (Protein N-term), Gln->pyro-Glu (N-term Q), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 0.9 Da |
| Fragment mass tolerance | : | ± 0.6 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-TRAP |
| Number of queries | : | 33,191 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 32 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
| Peptide matches | in target | in Decoy | FDR |
|---|---|---|---|
| – above identity threshold | 2343 | 96 | 4.10% |
| – above identity or homology threshold | 2851 | 220 | 7.72% |
Decoy results are available in |
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61| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RS4X_MOUSE | 255 | 40S ribosomal protein S4, X isoform OS=Mus musculus GN=Rps4x PE=2 SV=2 |
62| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::ROA2_MOUSE | 255 | Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus GN=Hnrnpa2b1 PE=1 SV=2 | |
| 2 | 2::ROA1_MOUSE | 41 | Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus GN=Hnrnpa1 PE=1 SV=2 | |
63| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RL8_MOUSE | 253 | 60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2 |
64| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RS13_MOUSE | 242 | 40S ribosomal protein S13 OS=Mus musculus GN=Rps13 PE=1 SV=2 |
65| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::DHRS1_MOUSE | 239 | Dehydrogenase/reductase SDR family member 1 OS=Mus musculus GN=Dhrs1 PE=2 SV=1 |
66| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::ALBU_MOUSE | 237 | Serum albumin OS=Mus musculus GN=Alb PE=1 SV=3 | |
| 2 | 2::IRF7_MOUSE | 29 | Interferon regulatory factor 7 OS=Mus musculus GN=Irf7 PE=1 SV=1 | |
67| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::OST48_MOUSE | 237 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus GN=Ddost PE=1 SV=1 |
68| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RS10_MOUSE | 236 | 40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1 |
69| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::NUCB1_MOUSE | 236 | Nucleobindin-1 OS=Mus musculus GN=Nucb1 PE=1 SV=2 |
70| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RS16_MOUSE | 236 | 40S ribosomal protein S16 OS=Mus musculus GN=Rps16 PE=2 SV=4 |
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