MASCOT Search Results

Search metadata
User :  
E-mail :  
Search title : iPRG2008 SwissProt Mouse
MS data file : D:\iPRG2008\mgf\merged.mgf
Databases :

1: cRAP 20090731 (111 sequences; 37,180 residues)

2: SwissProt 57.14 (514,789 sequences; 181,163,771 residues)
Taxonomy :

1: (none)

2: Mus. (16,273 sequences)
Timestamp : 5 Mar 2010 at 14:04:48 GMT
Warning : No taxonomy indexes for cRAP, taxonomy 'Mus.' ignored. Searching all entries in cRAP
Repeat search

[help]

Export

Not what you expected? Try the select summary.

Search parameters
Type of search : MS/MS Ion Search
Enzyme : Trypsin/P
Fixed modifications : iTRAQ4plex (K), iTRAQ4plex (N-term), Methylthio (C)
Variable modifications : Acetyl (Protein N-term), Gln->pyro-Glu (N-term Q), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 0.9 Da
Fragment mass tolerance : ± 0.6 Da
Max missed cleavages : 1
Instrument type : ESI-TRAP
Number of queries : 33,191

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 32 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

Filters

[help]

Decoy search summary
Peptide matches in target in Decoy FDR
  – above identity threshold 2343 96 4.10%
  – above identity or homology threshold 2851 220 7.72%

Decoy results are available in the decoy report.

Show

Protein families 351–360 (out of 482)

Page: Previous 1 …31 32 33 34 35 36 37 38 39 40 41 … 49 Next 

+351

Accession Score Description
1 2::SFRS3_MOUSE 30 Splicing factor, arginine/serine-rich 3 OS=Mus musculus GN=Sfrs3 PE=2 SV=1

+352

Accession Score Description
1 2::SDF2L_MOUSE 30 Stromal cell-derived factor 2-like protein 1 OS=Mus musculus GN=Sdf2l1 PE=2 SV=2

+353

Accession Score Description
1 2::ELL_MOUSE 30 RNA polymerase II elongation factor ELL OS=Mus musculus GN=Ell PE=2 SV=1

+354

Accession Score Description
1 2::NFH_MOUSE 29 Neurofilament heavy polypeptide OS=Mus musculus GN=Nefh PE=1 SV=3

+355

Accession Score Description
1 2::CP3AD_MOUSE 29 Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1

+356

Accession Score Description
1 2::FA73A_MOUSE 29 Protein FAM73A OS=Mus musculus GN=Fam73a PE=2 SV=1

+357

Accession Score Description
1 2::TECR_MOUSE 29 Trans-2,3-enoyl-CoA reductase OS=Mus musculus GN=Tecr PE=1 SV=1

+358

Accession Score Description
1 2::K22E_MOUSE 29 Keratin, type II cytoskeletal 2 epidermal OS=Mus musculus GN=Krt2 PE=1 SV=1

+359

Accession Score Description
1 2::TMED4_MOUSE 29 Transmembrane emp24 domain-containing protein 4 OS=Mus musculus GN=Tmed4 PE=2 SV=1

+360

Accession Score Description
1 2::CND1_MOUSE 29 Condensin complex subunit 1 OS=Mus musculus GN=Ncapd2 PE=1 SV=2
Page: Previous 1 …31 32 33 34 35 36 37 38 39 40 41 … 49 Next 

Not what you expected? Try the select summary.

Mascot: http://www.matrixscience.com/