MASCOT Search ResultsMASCOT Search Results| User | : | |
|---|---|---|
| : | ||
| Search title | : | iPRG2008 SwissProt Mouse |
| MS data file | : | D:\iPRG2008\mgf\merged.mgf |
| Databases | : | 1: cRAP 20090731 (111 sequences; 37,180 residues) 2: SwissProt 57.14 (514,789 sequences; 181,163,771 residues) |
| Taxonomy | : | 1: (none) 2: Mus. (16,273 sequences) |
| Timestamp | : | 5 Mar 2010 at 14:04:48 GMT |
| Warning | : | No taxonomy indexes for cRAP, taxonomy 'Mus.' ignored. Searching all entries in cRAP |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | Trypsin/P |
| Fixed modifications | : | iTRAQ4plex (K), iTRAQ4plex (N-term), Methylthio (C) |
| Variable modifications | : | Acetyl (Protein N-term), Gln->pyro-Glu (N-term Q), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 0.9 Da |
| Fragment mass tolerance | : | ± 0.6 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-TRAP |
| Number of queries | : | 33,191 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 32 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
| Peptide matches | in target | in Decoy | FDR |
|---|---|---|---|
| – above identity threshold | 2343 | 96 | 4.10% |
| – above identity or homology threshold | 2851 | 220 | 7.72% |
Decoy results are available in |
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21| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::CES3_MOUSE | 619 | Carboxylesterase 3 OS=Mus musculus GN=Ces3 PE=1 SV=1 | |
| 3 | 2::ESTN_MOUSE | 217 | Liver carboxylesterase N OS=Mus musculus GN=Es1 PE=1 SV=3 | |
| 2 | 2::EST1_MOUSE | 321 | Liver carboxylesterase 1 OS=Mus musculus GN=Ces1 PE=2 SV=1 | |
| 4 | 2::EST22_MOUSE | 175 | Liver carboxylesterase 22 OS=Mus musculus GN=Es22 PE=1 SV=1 | |
22| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::MTP_MOUSE | 571 | Microsomal triglyceride transfer protein large subunit OS=Mus musculus GN=Mttp PE=2 SV=2 |
23| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::CP2DA_MOUSE | 571 | Cytochrome P450 2D10 OS=Mus musculus GN=Cyp2d10 PE=2 SV=2 | |
| 2 | 2::CP2D9_MOUSE | 309 | Cytochrome P450 2D9 OS=Mus musculus GN=Cyp2d9 PE=1 SV=1 | |
| 3 | 2::CP2DQ_MOUSE | 258 | Cytochrome P450 2D26 OS=Mus musculus GN=Cyp2d26 PE=1 SV=1 | |
24| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RLA2_MOUSE | 538 | 60S acidic ribosomal protein P2 OS=Mus musculus GN=Rplp2 PE=1 SV=3 |
25| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::PDIA4_MOUSE | 499 | Protein disulfide-isomerase A4 OS=Mus musculus GN=Pdia4 PE=1 SV=2 |
26| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RL7_MOUSE | 497 | 60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2 |
27| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::NUCL_MOUSE | 476 | Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2 |
28| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RL6_MOUSE | 476 | 60S ribosomal protein L6 OS=Mus musculus GN=Rpl6 PE=1 SV=3 |
29| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::CP2F2_MOUSE | 448 | Cytochrome P450 2F2 OS=Mus musculus GN=Cyp2f2 PE=2 SV=1 |
30| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RRBP1_MOUSE | 445 | Ribosome-binding protein 1 OS=Mus musculus GN=Rrbp1 PE=2 SV=2 |
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