MASCOT Search Results

Search metadata
User :  
E-mail :  
Search title : iPRG2008 SwissProt Mouse
MS data file : D:\iPRG2008\mgf\merged.mgf
Databases :

1: cRAP 20090731 (111 sequences; 37,180 residues)

2: SwissProt 57.14 (514,789 sequences; 181,163,771 residues)
Taxonomy :

1: (none)

2: Mus. (16,273 sequences)
Timestamp : 5 Mar 2010 at 14:04:48 GMT
Warning : No taxonomy indexes for cRAP, taxonomy 'Mus.' ignored. Searching all entries in cRAP
Repeat search

[help]

Export

Not what you expected? Try the select summary.

Search parameters
Type of search : MS/MS Ion Search
Enzyme : Trypsin/P
Fixed modifications : iTRAQ4plex (K), iTRAQ4plex (N-term), Methylthio (C)
Variable modifications : Acetyl (Protein N-term), Gln->pyro-Glu (N-term Q), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 0.9 Da
Fragment mass tolerance : ± 0.6 Da
Max missed cleavages : 1
Instrument type : ESI-TRAP
Number of queries : 33,191

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 32 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

Filters

[help]

Decoy search summary
Peptide matches in target in Decoy FDR
  – above identity threshold 2343 96 4.10%
  – above identity or homology threshold 2851 220 7.72%

Decoy results are available in the decoy report.

Show

Protein families 271–280 (out of 482)

Page: Previous 1 …23 24 25 26 27 28 29 30 31 32 33 … 49 Next 

+271

Accession Score Description
1 2::CP4AA_MOUSE 40 Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE=2 SV=1

+272

Accession Score Description
1 2::TMEDA_MOUSE 39 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus GN=Tmed10 PE=2 SV=1

+273

Accession Score Description
1 1::CYC_HUMAN 39 CYC_HUMAN

+274

Accession Score Description
1 2::APMAP_MOUSE 39 Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1

+275

Accession Score Description
1 2::ALDOB_MOUSE 39 Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3

+276

Accession Score Description
1 2::IIGP1_MOUSE 39 Interferon-inducible GTPase 1 OS=Mus musculus GN=Iigp1 PE=1 SV=2

+277

Accession Score Description
1 2::SGPL1_MOUSE 39 Sphingosine-1-phosphate lyase 1 OS=Mus musculus GN=Sgpl1 PE=2 SV=1

+278

Accession Score Description
1 2::BRCA1_MOUSE 39 Breast cancer type 1 susceptibility protein homolog OS=Mus musculus GN=Brca1 PE=1 SV=2

+279

Accession Score Description
1 2::NUDT7_MOUSE 38 Peroxisomal coenzyme A diphosphatase NUDT7 OS=Mus musculus GN=Nudt7 PE=1 SV=2

+280

Accession Score Description
1 2::SFRS5_MOUSE 38 Splicing factor, arginine/serine-rich 5 OS=Mus musculus GN=Sfrs5 PE=1 SV=1
Page: Previous 1 …23 24 25 26 27 28 29 30 31 32 33 … 49 Next 

Not what you expected? Try the select summary.

Mascot: http://www.matrixscience.com/