MASCOT Search Results

Search metadata
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Search title : iPRG2008 SwissProt Mouse
MS data file : D:\iPRG2008\mgf\merged.mgf
Databases :

1: cRAP 20090731 (111 sequences; 37,180 residues)

2: SwissProt 57.14 (514,789 sequences; 181,163,771 residues)
Taxonomy :

1: (none)

2: Mus. (16,273 sequences)
Timestamp : 5 Mar 2010 at 14:04:48 GMT
Warning : No taxonomy indexes for cRAP, taxonomy 'Mus.' ignored. Searching all entries in cRAP
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Search parameters
Type of search : MS/MS Ion Search
Enzyme : Trypsin/P
Fixed modifications : iTRAQ4plex (K), iTRAQ4plex (N-term), Methylthio (C)
Variable modifications : Acetyl (Protein N-term), Gln->pyro-Glu (N-term Q), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 0.9 Da
Fragment mass tolerance : ± 0.6 Da
Max missed cleavages : 1
Instrument type : ESI-TRAP
Number of queries : 33,191

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 32 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

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Decoy search summary
Peptide matches in target in Decoy FDR
  – above identity threshold 2343 96 4.10%
  – above identity or homology threshold 2851 220 7.72%

Decoy results are available in the decoy report.

Show

Protein families 201–210 (out of 482)

Page: Previous 1 …16 17 18 19 20 21 22 23 24 25 26 … 49 Next 

+201

Accession Score Description
1 2::HNRPQ_MOUSE 57 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2

+202

Accession Score Description
Family member distances as a dendrogram 1 2::RS27L_MOUSE 56 40S ribosomal protein S27-like protein OS=Mus musculus GN=Rps27l PE=2 SV=3
2 2::RS27_MOUSE 53 40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3

+203

Accession Score Description
1 2::ATLA2_MOUSE 56 Atlastin-2 OS=Mus musculus GN=Atl2 PE=1 SV=1

+204

Accession Score Description
1 2::SPA3G_MOUSE 56 Serine protease inhibitor A3G OS=Mus musculus GN=Serpina3g PE=2 SV=2

+205

Accession Score Description
1 2::SSRD_MOUSE 55 Translocon-associated protein subunit delta OS=Mus musculus GN=Ssr4 PE=2 SV=1

+206

Accession Score Description
1 2::CO8A_MOUSE 55 Complement component C8 alpha chain OS=Mus musculus GN=C8a PE=2 SV=1

+207

Accession Score Description
1 2::DGAT1_MOUSE 55 Diacylglycerol O-acyltransferase 1 OS=Mus musculus GN=Dgat1 PE=1 SV=1

+208

Accession Score Description
1 2::RS17_MOUSE 55 40S ribosomal protein S17 OS=Mus musculus GN=Rps17 PE=1 SV=2

+209

Accession Score Description
1 2::MCFD2_MOUSE 54 Multiple coagulation factor deficiency protein 2 homolog OS=Mus musculus GN=Mcfd2 PE=2 SV=1

+210

Accession Score Description
1 2::ATPD_MOUSE 53 ATP synthase subunit delta, mitochondrial OS=Mus musculus GN=Atp5d PE=1 SV=1
Page: Previous 1 …16 17 18 19 20 21 22 23 24 25 26 … 49 Next 

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