MASCOT Search ResultsMASCOT Search Results| User | : | |
|---|---|---|
| : | ||
| Search title | : | iPRG2008 SwissProt Mouse |
| MS data file | : | D:\iPRG2008\mgf\merged.mgf |
| Databases | : | 1: cRAP 20090731 (111 sequences; 37,180 residues) 2: SwissProt 57.14 (514,789 sequences; 181,163,771 residues) |
| Taxonomy | : | 1: (none) 2: Mus. (16,273 sequences) |
| Timestamp | : | 5 Mar 2010 at 14:04:48 GMT |
| Warning | : | No taxonomy indexes for cRAP, taxonomy 'Mus.' ignored. Searching all entries in cRAP |
Not what you expected? Try 
the select summary.
| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | Trypsin/P |
| Fixed modifications | : | iTRAQ4plex (K), iTRAQ4plex (N-term), Methylthio (C) |
| Variable modifications | : | Acetyl (Protein N-term), Gln->pyro-Glu (N-term Q), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 0.9 Da |
| Fragment mass tolerance | : | ± 0.6 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-TRAP |
| Number of queries | : | 33,191 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 32 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
| Peptide matches | in target | in Decoy | FDR |
|---|---|---|---|
| – above identity threshold | 2343 | 96 | 4.10% |
| – above identity or homology threshold | 2851 | 220 | 7.72% |
Decoy results are available in |
|||
11| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RLA0_MOUSE | 758 | 60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3 |
12| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::ACSL1_MOUSE | 751 | Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1 | |
| 2 | 2::ACSL5_MOUSE | 297 | Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1 | |
13| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RL13_MOUSE | 748 | 60S ribosomal protein L13 OS=Mus musculus GN=Rpl13 PE=2 SV=3 |
14| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::CP2AC_MOUSE | 735 | Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE=1 SV=1 | |
| 4 | 2::CP2A5_MOUSE | 47 | Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2 SV=1 | |
| 2 | 2::CP2BA_MOUSE | 364 | Cytochrome P450 2B10 OS=Mus musculus GN=Cyp2b10 PE=1 SV=1 | |
| 3 | 2::CP2B9_MOUSE | 189 | Cytochrome P450 2B9 OS=Mus musculus GN=Cyp2b9 PE=2 SV=1 | |
15| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::CP3AB_MOUSE | 710 | Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1 |
16| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::EST31_MOUSE | 690 | Liver carboxylesterase 31 OS=Mus musculus GN=Es31 PE=1 SV=2 | |
| 3 | 2::PCYOX_MOUSE | 74 | Prenylcysteine oxidase OS=Mus musculus GN=Pcyox1 PE=1 SV=1 | |
| 2 | 2::CLH_MOUSE | 443 | Clathrin heavy chain 1 OS=Mus musculus GN=Cltc PE=1 SV=3 | |
17| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::RL4_MOUSE | 682 | 60S ribosomal protein L4 OS=Mus musculus GN=Rpl4 PE=1 SV=3 |
18| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::UD2B5_MOUSE | 679 | UDP-glucuronosyltransferase 2B5 OS=Mus musculus GN=Ugt2b5 PE=2 SV=1 | |
| 2 | 2::UD11_MOUSE | 446 | UDP-glucuronosyltransferase 1-1 OS=Mus musculus GN=Ugt1a1 PE=2 SV=1 | |
| 3 | 2::UD16_MOUSE | 268 | UDP-glucuronosyltransferase 1-6 OS=Mus musculus GN=Ugt1a6 PE=1 SV=1 | |
19| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::PDIA3_MOUSE | 675 | Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2 |
20| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | 2::NCPR_MOUSE | 635 | NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2 |
Not what you expected? Try the select summary.
Mascot: http://www.matrixscience.com/