MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Andy2683a |
| MS data file | : | Andy2683a.mgf |
| Database | : | P-putida 20180924 (5,556 sequences; 1,892,173 residues) |
| Timestamp | : | 2 Aug 2026 at 00:54:18 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Oxidation (M), Deamidated (NQ) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 50 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | Default |
| Number of queries | : | 4,770 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 20 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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81| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL7_PSEPK | 23 | 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain KT2440) GN=rplL PE=3 SV=2 |
82| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88QZ7_PSEPK | 23 | Sensory box protein OS=Pseudomonas putida (strain KT2440) GN=PP_0337 PE=4 SV=1 |
83| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOB_PSEPK | 22 | DNA-directed RNA polymerase subunit beta OS=Pseudomonas putida (strain KT2440) GN=rpoB PE=3 SV=1 |
84| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88F84_PSEPK | 22 | Aminotransferase, class V OS=Pseudomonas putida (strain KT2440) GN=PP_4214 PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 84.1 | Q88F84_PSEPK |
22 | 47889 | 3 (1) | 3 (1) | 0.07 | |
| Aminotransferase, class V OS=Pseudomonas putida (strain KT2440) GN=PP_4214 PE=3 SV=1 | |||||||
3 peptide matches (3 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 2299 |
312.6770 | 623.3394 | 623.3503 | -17.5 | 0 | 22 | 0.01 | 1Score > 15 indicates identity |
U | R.LAQHR.A | |
| 2997 |
561.3045 | 1120.5944 | 1120.5989 | -3.94 | 1 | 7 | 1.7 | 10Score > 21 indicates identity |
U | R.NILAYRSQR.D + Deamidated (NQ) | |
| 3760 |
1028.0304 | 2054.0462 | 2054.0354 | 5.28 | 0 | 1 | 1 | 1Score > 23 indicates identity Score > 14 indicates homology |
U | R.QIALTGSTTEGLGMIYGGLR.L + Oxidation (M); Deamidated (NQ) |
85| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88NE9_PSEPK | 22 | Fusaric acid resistance protein, putative OS=Pseudomonas putida (strain KT2440) GN=PP_1263 PE=3 SV=1 |
86| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88IZ2_PSEPK | 22 | Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_2857 PE=4 SV=1 |
87| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88J56_PSEPK | 22 | description |
88| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PDXH_PSEPK | 22 | Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Pseudomonas putida (strain KT2440) GN=pdxH PE=3 SV=1 |
89| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | A0A1Q2SRM5_STRLA | 21 | Indigoidine synthase OS=Streptomyces lavendulae OX=1914 GN=lbpA PE=4 SV=1 |
90| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88NS1_PSEPK | 21 | Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_1134 PE=4 SV=1 |
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