MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Andy2683a |
| MS data file | : | Andy2683a.mgf |
| Database | : | P-putida 20180924 (5,556 sequences; 1,892,173 residues) |
| Timestamp | : | 2 Aug 2026 at 00:54:18 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Oxidation (M), Deamidated (NQ) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 50 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | Default |
| Number of queries | : | 4,770 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 20 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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61| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88RR0_PSEPK | 26 | Smf protein OS=Pseudomonas putida (strain KT2440) GN=PP_0069 PE=4 SV=1 |
62| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88LF7_PSEPK | 26 | HlyD family secretion protein OS=Pseudomonas putida (strain KT2440) GN=PP_1976 PE=4 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 62.1 | Q88LF7_PSEPK |
26 | 42280 | 5 (1) | 4 (1) | 0.08 | |
| HlyD family secretion protein OS=Pseudomonas putida (strain KT2440) GN=PP_1976 PE=4 SV=1 | |||||||
| 2 samesets of Q88LF7_PSEPK | |||||||
| Q88DR9_PSEPK |
26 | 0 | 2 (1) | 2 (1) | 0.14 | ||
| description | |||||||
| Q88FF2_PSEPK |
26 | 0 | 1 (1) | 1 (1) | 0.06 | ||
| description | |||||||
5 peptide matches (4 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 2254 |
603.3472 | 602.3399 | 602.3388 | 1.93 | 0 | 26 | 0.033 | 1Score > 23 indicates identity |
U | R.LDLSR.A | |
| 2274 |
308.6649 | 615.3152 | 615.3162 | -1.61 | 0 | 10 | 0.64 | 1Score > 23 indicates identity Score > 21 indicates homology |
U | R.APAMAR.T | |
| 2573 |
1 |
409.1951 | 816.3756 | 816.4090 | -40.8 | 0 | 5 | 2.2 | 5Score > 21 indicates identity |
U | R.ADLQSQR.Q |
| 3787 |
422.0161 | 2105.0441 | 2104.9814 | 29.8 | 1 | 1 | 1.2 | 3Score > 23 indicates identity Score > 14 indicates homology |
U | K.GRFYESTDNAYVQGEITR.I |
63| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88PM9_PSEPK | 25 | Acetyltransferase, GNAT family OS=Pseudomonas putida (strain KT2440) GN=PP_0820 PE=4 SV=1 |
64| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88E45_PSEPK | 25 | description |
65| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88KW4_PSEPK | 25 | 3-oxoacyl-(Acyl-carrier-protein) reductase, putative OS=Pseudomonas putida (strain KT2440) GN=PP_2175 PE=3 SV=1 |
66| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88K56_PSEPK | 25 | Cysteine desulfurase OS=Pseudomonas putida (strain KT2440) GN=iscS-2 PE=4 SV=1 |
67| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | K2C1_HUMAN | 25 | Keratin, type II cytoskeletal 1 OS=Homo sapiens GN=KRT1 PE=1 SV=6 |
68| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88IC2_PSEPK | 25 | ABC transporter, permease protein, putative OS=Pseudomonas putida (strain KT2440) GN=PP_3077 PE=3 SV=1 |
69| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ANXA5_HUMAN | 25 | Annexin A5 OS=Homo sapiens GN=ANXA5 PE=1 SV=2 |
70| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88RE9_PSEPK | 25 | Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_0181 PE=4 SV=1 |
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