MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Andy2683a |
| MS data file | : | Andy2683a.mgf |
| Database | : | P-putida 20180924 (5,556 sequences; 1,892,173 residues) |
| Timestamp | : | 2 Aug 2026 at 00:54:18 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Oxidation (M), Deamidated (NQ) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 50 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | Default |
| Number of queries | : | 4,770 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 20 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88QF9_PSEPK | 31 | Outer membrane ferric siderophore receptor OS=Pseudomonas putida (strain KT2440) GN=PP_0535 PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RSGA_PSEPK | 31 | description |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88GG6_PSEPK | 31 | Response regulator/sensor histidine kinase OS=Pseudomonas putida (strain KT2440) GN=PP_3758 PE=4 SV=1 |
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88LF0_PSEPK | 30 | Sensory box protein OS=Pseudomonas putida (strain KT2440) GN=PP_1983 PE=4 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88Q18_PSEPK | 30 | ATP-dependent protease, putative OS=Pseudomonas putida (strain KT2440) GN=PP_0680 PE=4 SV=1 |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88R76_PSEPK | 30 | LysM domain protein OS=Pseudomonas putida (strain KT2440) GN=PP_0258 PE=4 SV=1 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88H31_PSEPK | 30 | Transcriptional regulator, LysR family OS=Pseudomonas putida (strain KT2440) GN=PP_3534 PE=4 SV=1 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88EG1_PSEPK | 30 | Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_4504 PE=4 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 38.1 | Q88EG1_PSEPK |
30 | 15786 | 7 (2) | 3 (2) | 0.48 | |
| Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_4504 PE=4 SV=1 | |||||||
7 peptide matches (3 non-duplicate, 4 duplicate)| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| UVRB_PSEPK |
28 | 0 | 38.1 | ||
| description | |||||
| 6HIS_TEV_PP_2664 |
25 | 74011 | 38.1 | ||
| Fusion_protein_N_term_6HISTEV_in_frame_with_PP_2664 | |||||
| 3 samesets of 6HIS_TEV_PP_2664 | |||||
| Q88JI5_PSEPK |
25 | 73505 | |||
| Sensory box histidine kinase/response regulator OS=Pseudomonas putida (strain KT2440) GN=PP_2664 PE=4 SV=1 | |||||
| Q88QU8_PSEPK |
25 | 0 | |||
| description | |||||
| Q88H58_PSEPK |
25 | 0 | |||
| description | |||||
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88QC4_PSEPK | 30 | Extracellular protein, putative OS=Pseudomonas putida (strain KT2440) GN=PP_0570 PE=4 SV=1 |
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88LJ7_PSEPK | 30 | Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_1934 PE=4 SV=1 |
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