MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Andy2682a |
| MS data file | : | Andy2682a.mgf |
| Database | : | P-putida 20180924 (5,556 sequences; 1,892,173 residues) |
| Timestamp | : | 2 Aug 2026 at 00:52:38 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Oxidation (M), Deamidated (NQ) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 50 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | Default |
| Number of queries | : | 4,656 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 20 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | LOLD_PSEPK | 18 | Lipoprotein-releasing system ATP-binding protein LolD OS=Pseudomonas putida (strain KT2440) GN=lolD PE=3 SV=2 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88L70_PSEPK | 17 | Multidrug efflux RND transporter OS=Pseudomonas putida (strain KT2440) GN=PP_2065 PE=4 SV=1 |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88JP4_PSEPK | 16 | Uncharacterized protein OS=Pseudomonas putida (strain KT2440) GN=PP_2605 PE=4 SV=1 |
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q9X4K7_STRCH | 15 | Acyl-CoA carboxylase subunit beta OS=Streptomyces coelicolor OX=1902 GN=pccB PE=1 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Q88P97_PSEPK | 15 | Lipopolysaccharide export system protein LptC OS=Pseudomonas putida (strain KT2440) GN=lptC PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 35.1 | Q88P97_PSEPK |
15 | 21336 | 2 (1) | 1 (1) | 0.16 | |
| Lipopolysaccharide export system protein LptC OS=Pseudomonas putida (strain KT2440) GN=lptC PE=3 SV=1 | |||||||
2 peptide matches (2 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 2389 |
808.4792 | 807.4719 | 807.4490 | 28.4 | 1 | 1 | 1.7 | 6Score > 16 indicates identity |
U | K.AYLKEGK.M | |
| 2393 |
404.7504 | 807.4862 | 807.4490 | 46.1 | 1 | 15 | 0.05 | 1Score > 15 indicates identity |
U | K.AYLKEGK.M |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARCA_PSEPK | 15 | Arginine deiminase OS=Pseudomonas putida (strain KT2440) GN=arcA PE=3 SV=1 |
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