MASCOT Search Results

Search metadata
User : Jennifer
E-mail : [email protected]
Search title : PRT1377_JBEI_2
MS data file : PRT1377_JBEI_2.mgf
Database : Ecoli-MetEng 20200720 (4,900 sequences; 1,661,431 residues)
Timestamp : 23 Jan 2026 at 21:31:54 GMT
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Search parameters
Type of search : MS/MS Ion Search
Enzyme : Trypsin
Fixed modifications : Carbamidomethyl (C)
Variable modifications : Deamidated (NQ), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 20 ppm
Fragment mass tolerance : ± 0.1 Da
Max missed cleavages : 1
Instrument type : ESI-FTICR
Number of queries : 7,287

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 15 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

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Unassigned peptides, 201–300 (out of 7204)


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Peptide matches not assigned to protein families (no details means no match)

Query Observed Mr(expt) Mr(calc) ppm  M Score Expect Rank Peptide
Query Observed Mr(expt) Mr(calc) ppm  M Score Expect Rank Peptide
6842 954.4337 1906.8528 1906.8784 -13.4 0 4 1.1 +1Score > 17 indicates identity MSQFFYIHPDNPQQR
6420 913.9153 1825.8160 1825.8304 -7.88 0 4 1.1 +1Score > 17 indicates identity QMYGLNAIEHSNYLR + 2 Deamidated (NQ); Oxidation (M)
6702 940.9276 1879.8406 1879.8291 6.13 0 4 1.2 +1Score > 17 indicates identity MIQEQTMLNVADNSGAR + 3 Deamidated (NQ)
5037 805.8662 1609.7178 1609.7406 -14.1 0 4 0.71 +1Score > 15 indicates identity MLQESVDALFDNGR + Oxidation (M)
5651 846.3846 1690.7546 1690.7484 3.72 0 4 0.83 +1Score > 16 indicates identity QYLMQFCPDAVFR + Deamidated (NQ); Oxidation (M)
6317 900.4092 1798.8038 1798.8196 -8.76 0 4 0.69 +1Score > 15 indicates identity TEGATVFGYQVMDPER
6892 954.4337 1906.8528 1906.8805 -14.5 0 4 1.1 +1Score > 17 indicates identity FAMGELPDEVLEICQR + Deamidated (NQ)
5257 819.3723 1636.7300 1636.7119 11.1 1 4 0.97 +1Score > 16 indicates identity RMGELMAESHASMR + 2 Oxidation (M)
5583 846.3846 1690.7546 1690.7403 8.49 0 4 0.83 +1Score > 16 indicates identity SEMGDLAQSVSHMQR + Oxidation (M)
2158 562.7557 1123.4968 1123.4894 6.65 0 4 0.62 +1Score > 14 indicates identity NLNDTNYNR + Deamidated (NQ)
2105 549.2505 1096.4864 1096.4893 -2.56 0 4 0.68 +1Score > 15 indicates identity DEMIMSAIR + 2 Oxidation (M)
2537 589.7679 1177.5212 1177.5107 8.95 0 4 0.58 +1Score > 14 indicates identity MQQSIDPAMR + 2 Deamidated (NQ)
2808 616.7802 1231.5458 1231.5503 -3.62 0 4 0.7 +1Score > 15 indicates identity MTDLHTDVER + Oxidation (M)
568 427.6943 853.3740 853.3786 -5.34 0 4 0.4 +1Score > 13 indicates identity NGTMMIR + 2 Oxidation (M)
4275 738.3355 1474.6564 1474.6582 -1.22 1 4 0.78 +1Score > 15 indicates identity AECQNQQGNLRR + 2 Deamidated (NQ)
5400 832.8785 1663.7424 1663.7723 -17.9 1 4 0.84 +1Score > 16 indicates identity TNGLMAQAQQQLGKR + 5 Deamidated (NQ); Oxidation (M)
4316 738.3355 1474.6564 1474.6582 -1.22 1 4 0.79 +1Score > 15 indicates identity AECQNQQGNLRR + 2 Deamidated (NQ)
3113 643.7925 1285.5704 1285.5761 -4.41 0 4 0.67 +1Score > 15 indicates identity MQAYFDQLDR
5930 873.3969 1744.7792 1744.7735 3.28 0 4 1.4 +1Score > 18 indicates identity GTLFPMCGMNLAFDR + Oxidation (M)
6401 913.9153 1825.8160 1825.8482 -17.6 1 4 1.1 +1Score > 17 indicates identity EDAQLLYGFNNKQER + 2 Deamidated (NQ)
4949 792.3600 1582.7054 1582.7045 0.58 1 4 0.67 +1Score > 15 indicates identity CQYETLVENNRR + 2 Deamidated (NQ)
3078 630.2864 1258.5582 1258.5724 -11.3 1 4 0.55 +1Score > 14 indicates identity VNDRSHQMEK + Oxidation (M)
5797 859.8907 1717.7668 1717.7808 -8.14 1 4 0.76 +1Score > 15 indicates identity GHSFEFRINGEDPGR + Deamidated (NQ)
2570 589.7679 1177.5212 1177.5107 8.95 0 4 0.6 +1Score > 14 indicates identity MQQSIDPAMR + 2 Deamidated (NQ)
3303 657.2986 1312.5826 1312.5757 5.26 0 4 0.91 +1Score > 16 indicates identity EYTWANLMER + Deamidated (NQ)
2617 603.2741 1204.5336 1204.5506 -14.1 0 4 0.91 +1Score > 16 indicates identity GCGITVDQAER
4264 738.3355 1474.6564 1474.6324 16.3 0 4 0.81 +1Score > 15 indicates identity QHQQFADQESVR + 3 Deamidated (NQ)
7021 967.9399 1933.8652 1933.8993 -17.6 1 4 1.1 +1Score > 17 indicates identity LSGFDMGYSGIQFGGDKR
6987 967.9399 1933.8652 1933.8298 18.3 1 4 1.1 +1Score > 17 indicates identity QSMGFDTNMEGGFLARR + 2 Deamidated (NQ); Oxidation (M)
2985 630.2846 1258.5546 1258.5621 -5.89 0 4 0.44 +1Score > 13 indicates identity ISMMPGMPSHR + Oxidation (M)
3934 711.3232 1420.6318 1420.6551 -16.3 1 4 1 +1Score > 16 indicates identity MRACINNQQIR + 2 Deamidated (NQ); Oxidation (M)
4822 778.8539 1555.6932 1555.7163 -14.8 0 4 0.8 +1Score > 15 indicates identity DMFWQLMVDLSR + Oxidation (M)
1705 522.2372 1042.4598 1042.4576 2.17 0 4 0.42 +1Score > 13 indicates identity GFADAIMMR + 2 Oxidation (M)
4756 778.8539 1555.6932 1555.7235 -19.5 1 4 0.81 +1Score > 15 indicates identity CAAGTGRFLDVMSR + Oxidation (M)
2403 576.2618 1150.5090 1150.5176 -7.40 0 4 0.79 +1Score > 15 indicates identity ELTENEMIR + Deamidated (NQ); Oxidation (M)
2788 616.7802 1231.5458 1231.5429 2.42 1 4 0.75 +1Score > 15 indicates identity REEEEQQQR + Deamidated (NQ)
2786 616.7802 1231.5458 1231.5656 -16.0 0 4 0.75 +1Score > 15 indicates identity ICEPFGPEQR
4781 778.8539 1555.6932 1555.7163 -14.8 0 4 0.82 +1Score > 15 indicates identity DMFWQLMVDLSR + Oxidation (M)
3554 670.8048 1339.5950 1339.6125 -13.0 1 4 1 +1Score > 16 indicates identity AANQAFMMERR + Oxidation (M)
4841 778.8539 1555.6932 1555.7163 -14.8 0 4 0.83 +1Score > 15 indicates identity DMFWQLMVDLSR + Oxidation (M)
3332 657.2986 1312.5826 1312.6057 -17.5 0 4 0.96 +1Score > 16 indicates identity LMITGFCWGGR + Oxidation (M)
1852 535.7434 1069.4722 1069.4862 -13.1 0 4 0.44 +1Score > 13 indicates identity YCVNSASLR + Deamidated (NQ)
659 441.1930 880.3714 880.3562 17.3 0 4 0.53 +1Score > 13 indicates identity EDEAFNR + Deamidated (NQ)
5246 819.3723 1636.7300 1636.7119 11.1 1 4 1.1 +1Score > 16 indicates identity RMGELMAESHASMR + 2 Oxidation (M)
2077 549.2496 1096.4846 1096.4924 -7.07 0 4 0.75 +1Score > 15 indicates identity EITEQYEGK + Deamidated (NQ)
4828 778.8539 1555.6932 1555.7163 -14.8 0 4 0.84 +1Score > 15 indicates identity DMFWQLMVDLSR + Oxidation (M)
5584 846.3846 1690.7546 1690.7403 8.49 0 4 0.94 +1Score > 16 indicates identity SEMGDLAQSVSHMQR + Oxidation (M)
5910 873.3969 1744.7792 1744.7904 -6.39 0 4 1.6 +1Score > 18 indicates identity DIDVDYASHSPQIER + Deamidated (NQ)
2378 576.2618 1150.5090 1150.5111 -1.76 0 3 0.83 +1Score > 15 indicates identity LMGMTPTGNGR + Deamidated (NQ); Oxidation (M)
5615 846.3846 1690.7546 1690.7403 8.49 0 3 0.94 +1Score > 16 indicates identity SEMGDLAQSVSHMQR + Oxidation (M)
6847 954.4337 1906.8528 1906.8784 -13.4 0 3 1.3 +1Score > 17 indicates identity MSQFFYIHPDNPQQR
897 454.7066 907.3986 907.4035 -5.38 0 3 0.61 +1Score > 14 indicates identity AQFEEER
1805 535.7434 1069.4722 1069.4862 -13.1 0 3 0.45 +1Score > 13 indicates identity YCVNSASLR + Deamidated (NQ)
3118 643.7925 1285.5704 1285.5761 -4.41 0 3 0.75 +1Score > 15 indicates identity MQAYFDQLDR
794 441.2004 880.3862 880.3927 -7.31 0 3 0.73 +1Score > 15 indicates identity DGDGFGVSK
3368 657.2986 1312.5826 1312.5870 -3.33 0 3 1 +1Score > 16 indicates identity SYITGEFGHMR + Oxidation (M)
4274 738.3355 1474.6564 1474.6582 -1.22 1 3 0.89 +1Score > 15 indicates identity AECQNQQGNLRR + 2 Deamidated (NQ)
667 441.1932 880.3718 880.3562 17.7 0 3 0.55 +1Score > 13 indicates identity EDEAFNR + Deamidated (NQ)
6549 927.4214 1852.8282 1852.8625 -18.5 1 3 1.2 +1Score > 17 indicates identity LNNKEMNAQLDYLNR + 2 Deamidated (NQ); Oxidation (M)
155 387.1813 772.3480 772.3351 16.7 0 3 0.46 +1Score > 13 indicates identity DPNGDVR + Deamidated (NQ)
3990 711.3232 1420.6318 1420.6187 9.25 1 3 1.1 +1Score > 16 indicates identity MRAQNCVGPNTR + 2 Deamidated (NQ); Oxidation (M)
6202 900.4092 1798.8038 1798.7953 4.76 0 3 0.8 +1Score > 15 indicates identity CLNHMFAAEIYMQR + Oxidation (M)
3969 711.3232 1420.6318 1420.6187 9.25 1 3 1.1 +1Score > 16 indicates identity MRAQNCVGPNTR + 2 Deamidated (NQ); Oxidation (M)
654 441.1926 880.3706 880.3562 16.4 0 3 0.6 +1Score > 14 indicates identity EDEAFNR + Deamidated (NQ)
2905 616.7802 1231.5458 1231.5615 -12.7 1 3 0.81 +1Score > 15 indicates identity IREMSDNDPR
662 441.1931 880.3716 880.3562 17.5 0 3 0.56 +1Score > 13 indicates identity EDEAFNR + Deamidated (NQ)
5599 846.3846 1690.7546 1690.7403 8.49 0 3 0.98 +1Score > 16 indicates identity SEMGDLAQSVSHMQR + Oxidation (M)
6296 900.4092 1798.8038 1798.7870 9.35 0 3 0.82 +1Score > 15 indicates identity TQADAWDINQGHQSAR + 2 Deamidated (NQ)
3027 630.2864 1258.5582 1258.5387 15.5 0 3 0.64 +1Score > 14 indicates identity NPDMPADELEK + Deamidated (NQ)
1627 522.2314 1042.4482 1042.4277 19.7 0 3 0.52 +1Score > 13 indicates identity FSLGNMDDK + Deamidated (NQ); Oxidation (M)
4308 738.3355 1474.6564 1474.6582 -1.22 1 3 0.92 +1Score > 15 indicates identity AECQNQQGNLRR + 2 Deamidated (NQ)
6460 913.9153 1825.8160 1825.8251 -4.96 0 3 1.3 +1Score > 17 indicates identity MTNNDTTLQLSSVLNR + 4 Deamidated (NQ); Oxidation (M)
2308 576.2618 1150.5090 1150.5117 -2.32 0 3 0.88 +1Score > 15 indicates identity YMTWDNPPK
2734 603.2741 1204.5336 1204.5394 -4.75 1 3 1 +1Score > 16 indicates identity EAAASEKDPCK
962 454.7066 907.3986 907.4035 -5.38 0 3 0.64 +1Score > 14 indicates identity AQFEEER
4050 711.3232 1420.6318 1420.6187 9.25 1 3 1.2 +1Score > 16 indicates identity MRAQNCVGPNTR + 2 Deamidated (NQ); Oxidation (M)
4989 792.3600 1582.7054 1582.6875 11.4 0 3 0.79 +1Score > 15 indicates identity VYFCDPQSPWQR + Deamidated (NQ)
5592 846.3846 1690.7546 1690.7403 8.49 0 3 1 +1Score > 16 indicates identity SEMGDLAQSVSHMQR + Oxidation (M)
6314 900.4092 1798.8038 1798.7870 9.35 0 3 0.83 +1Score > 15 indicates identity TQADAWDINQGHQSAR + 2 Deamidated (NQ)
4776 778.8539 1555.6932 1555.7123 -12.2 1 3 0.91 +1Score > 15 indicates identity FVENKSQLMGACR + Deamidated (NQ); Oxidation (M)
2260 562.7557 1123.4968 1123.4894 6.65 0 3 0.75 +1Score > 14 indicates identity NLNDTNYNR + Deamidated (NQ)
6085 886.9030 1771.7914 1771.7584 18.7 1 3 1.1 +1Score > 16 indicates identity DPASDQMQHWKEQR + Deamidated (NQ); Oxidation (M)
954 454.7066 907.3986 907.4035 -5.38 0 3 0.65 +1Score > 14 indicates identity AQFEEER
3633 684.3109 1366.6072 1366.6153 -5.91 1 3 1.1 +1Score > 16 indicates identity FQQQKDWETR + 2 Deamidated (NQ)
6568 927.4214 1852.8282 1852.8625 -18.5 1 3 1.2 +1Score > 17 indicates identity LNNKEMNAQLDYLNR + 2 Deamidated (NQ); Oxidation (M)
6979 967.9399 1933.8652 1933.8476 9.14 0 3 1.3 +1Score > 17 indicates identity MSTQYETQGYTINNAGR + Deamidated (NQ)
7107 967.9399 1933.8652 1933.9017 -18.9 1 3 1.3 +1Score > 17 indicates identity QDIDRWQSTSVNDVLR + 3 Deamidated (NQ)
1909 535.7434 1069.4722 1069.4862 -13.1 1 3 0.49 +1Score > 13 indicates identity EAMGFSEKR + Oxidation (M)
5775 859.8907 1717.7668 1717.7763 -5.51 0 3 0.9 +1Score > 15 indicates identity EMLEHMASTLAQGER + Oxidation (M)
5399 832.8785 1663.7424 1663.7406 1.10 1 3 1 +1Score > 16 indicates identity MDPSLNTMANDRQR + Oxidation (M)
1180 481.7188 961.4230 961.4253 -2.38 0 3 0.79 +1Score > 15 indicates identity SGNDLHYR + Deamidated (NQ)
1291 481.7188 961.4230 961.4215 1.59 0 3 0.79 +1Score > 15 indicates identity GSMTFFEK + Oxidation (M)
3721 684.3109 1366.6072 1366.6266 -14.1 1 3 1.1 +1Score > 16 indicates identity DWRETNIDYR
6283 900.4092 1798.8038 1798.7870 9.35 0 3 0.87 +1Score > 15 indicates identity TQADAWDINQGHQSAR + 2 Deamidated (NQ)
6299 900.4092 1798.8038 1798.7870 9.35 0 3 0.87 +1Score > 15 indicates identity TQADAWDINQGHQSAR + 2 Deamidated (NQ)
5923 873.3969 1744.7792 1744.7735 3.28 0 3 1.7 +1Score > 18 indicates identity GTLFPMCGMNLAFDR + Oxidation (M)
6224 900.4092 1798.8038 1798.7953 4.76 0 3 0.87 +1Score > 15 indicates identity CLNHMFAAEIYMQR + Oxidation (M)
3722 684.3109 1366.6072 1366.6266 -14.1 1 3 1.1 +1Score > 16 indicates identity DWRETNIDYR
6252 900.4092 1798.8038 1798.8308 -15.0 0 3 0.88 +1Score > 15 indicates identity IYDSDSILSMHHEPR
6289 900.4092 1798.8038 1798.7870 9.35 0 3 0.88 +1Score > 15 indicates identity TQADAWDINQGHQSAR + 2 Deamidated (NQ)
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