MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
Not what you expected? Try 
the select summary.
| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
81| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CLPX_CLOB8 | 59 | ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=clpX PE=3 SV=1 |
82| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | FLAE_VIBCH | 59 | Flagellin E OS=Vibrio cholerae GN=flaE PE=3 SV=1 |
83| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS9_PSEE4 | 59 | 30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1 |
84| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS20_PSE14 | 58 | 30S ribosomal protein S20 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsT PE=3 SV=1 |
85| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RDRP_ACLSA | 57 | RNA-directed RNA polymerase OS=Apple chlorotic leaf spot virus (isolate apple) PE=4 SV=1 |
86| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | TIG_PSEPK | 55 | Trigger factor OS=Pseudomonas putida (strain KT2440) GN=tig PE=3 SV=2 |
87| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PUR5_PSEMY | 55 | Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas mendocina (strain ymp) GN=purM PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 87.1 | PUR5_PSEMY |
55 | 37182 | 3 (2) | 2 (2) | 0.13 | |
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas mendocina (strain ymp) GN=purM PE=3 SV=1 | |||||||
| 5 samesets of PUR5_PSEMY | |||||||
| PUR5_PSEP1 |
55 | 37375 | 3 (2) | 2 (2) | 0.13 | ||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=purM PE=3 SV=1 | |||||||
| PUR5_PSEPF |
55 | 37293 | 3 (2) | 2 (2) | 0.13 | ||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas fluorescens (strain Pf0-1) GN=purM PE=3 SV=1 | |||||||
| PUR5_PSEPG |
55 | 37375 | 3 (2) | 2 (2) | 0.13 | ||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas putida (strain GB-1) GN=purM PE=3 SV=1 | |||||||
| PUR5_PSEPK |
55 | 37375 | 3 (2) | 2 (2) | 0.13 | ||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas putida (strain KT2440) GN=purM PE=3 SV=1 | |||||||
| PUR5_PSEPW |
55 | 37493 | 3 (2) | 2 (2) | 0.13 | ||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas putida (strain W619) GN=purM PE=3 SV=1 | |||||||
3 peptide matches (2 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1923 |
443.2998 | 1326.8776 | 1326.9002 | -17.1 | 1 | 37 | 0.00027 | 1Score > 14 indicates identity |
U | R.IYVKPLLKLIK.D | |
| 3826 |
1 |
799.7635 | 2396.2687 | 2396.2336 | 14.7 | 0 | 34 | 0.0015 | 1Score > 36 indicates identity Score > 18 indicates homology |
U | K.VATGDALIALPSSGPHSNGYSLIR.K + Deamidated (NQ) |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| PUR5_PSE14 |
37 | 37357 | 87.1 | ||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=purM PE=3 SV=1 | |||||
| 8 samesets of PUR5_PSE14 | |||||
| PUR5_PSEA8 |
37 | 37670 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas aeruginosa (strain LESB58) GN=purM PE=3 SV=1 | |||||
| PUR5_PSEAB |
37 | 37670 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=purM PE=3 SV=1 | |||||
| PUR5_PSEAE |
37 | 37612 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas aeruginosa GN=purM PE=3 SV=1 | |||||
| PUR5_PSEE4 |
37 | 37486 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas entomophila (strain L48) GN=purM PE=3 SV=1 | |||||
| PUR5_PSEF5 |
37 | 37377 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=purM PE=3 SV=1 | |||||
| PUR5_PSEFS |
37 | 37406 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas fluorescens (strain SBW25) GN=purM PE=3 SV=1 | |||||
| PUR5_PSESM |
37 | 37414 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas syringae pv. tomato GN=purM PE=3 SV=1 | |||||
| PUR5_PSEU2 |
37 | 37355 | |||
| Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=purM PE=3 SV=1 | |||||
88| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | MOAC_METB6 | 55 | Probable molybdenum cofactor biosynthesis protein C OS=Methanoregula boonei (strain 6A8) GN=moaC PE=3 SV=1 |
89| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS4_PSEPW | 55 | 30S ribosomal protein S4 OS=Pseudomonas putida (strain W619) GN=rpsD PE=3 SV=1 |
90| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ISPD_ALKMQ | 54 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispD PE=3 SV=1 |
Not what you expected? Try the select summary.
Mascot: http://www.matrixscience.com/