MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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61| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL7_PSEP1 | 87 | 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplL PE=3 SV=1 |
62| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCD_PSEAE | 87 | Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2 |
63| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACCA_PSEPK | 80 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=accA PE=3 SV=1 |
64| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CISY_PSEAE | 79 | Citrate synthase OS=Pseudomonas aeruginosa GN=gltA PE=3 SV=2 |
65| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL14_PSE14 | 77 | 50S ribosomal protein L14 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplN PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 65.1 | RL14_PSE14 |
77 | 13458 | 9 (3) | 5 (2) | 0.39 | |
| 50S ribosomal protein L14 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplN PE=3 SV=1 | |||||||
| 51 samesets of RL14_PSE14 |
|||||||
9 peptide matches (5 non-duplicate, 4 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 674 |
1 |
395.2362 | 788.4578 | 788.4545 | 4.27 | 0 | 26 | 0.86 | 1Score > 39 indicates identity Score > 38 indicates homology |
R.IFGPVTR.E | |
| 699 |
400.7182 | 799.4218 | 799.4188 | 3.80 | 0 | 17 | 1.2 | 2Score > 39 indicates identity Score > 31 indicates homology |
U | K.QEPIGTR.I | |
| 1004 |
1 |
940.5813 | 939.5740 | 939.5641 | 10.6 | 1 | 25 | 0.034 | 1Score > 35 indicates identity Score > 23 indicates homology |
U | K.IVSLAPEVL.- |
| 1038 |
1 |
475.2755 | 948.5364 | 948.5280 | 8.89 | 0 | 34 | 0.13 | 1Score > 39 indicates identity Score > 38 indicates homology |
R.YAGIGDIIK.V | |
| 1798 |
1 |
638.3419 | 1274.6692 | 1274.6619 | 5.78 | 0 | 63 | 0.00035 | 1Score > 41 indicates identity |
U | R.FDGNAAVLLNNK.Q |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RK14_ACOCL |
25 | 13643 | 65.1 | ||
| 50S ribosomal protein L14, chloroplastic OS=Acorus calamus GN=rpl14 PE=3 SV=1 | |||||
| 459 samesets of RK14_ACOCL |
|||||
66| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ASPQ_PSEPK | 77 | Glutaminase-asparaginase OS=Pseudomonas putida (strain KT2440) GN=ansB PE=3 SV=1 |
67| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ETFB_PSEAE | 77 | Electron transfer flavoprotein subunit beta OS=Pseudomonas aeruginosa GN=etfB PE=3 SV=1 |
68| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PURA_PSEPG | 76 | Adenylosuccinate synthetase OS=Pseudomonas putida (strain GB-1) GN=purA PE=3 SV=1 |
69| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PHAA_PSEOL | 74 | Poly(3-hydroxyalkanoate) polymerase 1 OS=Pseudomonas oleovorans GN=phaA PE=3 SV=1 |
70| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | KPRS_PSEPK | 73 | Ribose-phosphate pyrophosphokinase OS=Pseudomonas putida (strain KT2440) GN=prs PE=3 SV=1 |
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