MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
1| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFTU2_PSEPK | 1352 | Elongation factor Tu-B OS=Pseudomonas putida (strain KT2440) GN=tufB PE=3 SV=1 | |
| 4 | EFTU_CYAP7 | 34 | Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1 | |
| 3 | EFTU_CARRP | 180 | Elongation factor Tu OS=Carsonella ruddii (strain PV) GN=tuf PE=3 SV=1 | |
| 2 | EFTU1_PSEPK | 1236 | Elongation factor Tu-A OS=Pseudomonas putida (strain KT2440) GN=tufA PE=3 SV=1 | |
2| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPB_PSEPG | 1121 | ATP synthase subunit beta OS=Pseudomonas putida (strain GB-1) GN=atpD PE=3 SV=1 | |
| 2 | ATPB_PSEFS | 949 | ATP synthase subunit beta OS=Pseudomonas fluorescens (strain SBW25) GN=atpD PE=3 SV=1 | |
3| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPA_PSEPK | 954 | ATP synthase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=atpA PE=3 SV=1 | |
| 2 | ATPA_RICAH | 173 | ATP synthase subunit alpha OS=Rickettsia akari (strain Hartford) GN=atpA PE=3 SV=1 | |
| 3 | ATPA_VEREI | 163 | ATP synthase subunit alpha OS=Verminephrobacter eiseniae (strain EF01-2) GN=atpA PE=3 SV=1 | |
4| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CH60_PSEPK | 667 | 60 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groL PE=3 SV=1 | |
| 4 | CH602_SORC5 | 69 | 60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1 | |
| 3 | CH60_COLMA | 82 | 60 kDa chaperonin OS=Colwellia maris GN=groL PE=3 SV=2 | |
| 2 | CH601_ECOK1 | 119 | 60 kDa chaperonin 1 OS=Escherichia coli O1:K1 / APEC GN=groL1 PE=3 SV=1 | |
5| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOC_PSEPK | 451 | DNA-directed RNA polymerase subunit beta' OS=Pseudomonas putida (strain KT2440) GN=rpoC PE=3 SV=1 | |
| 4 | RPOC_PELUB | 108 | DNA-directed RNA polymerase subunit beta' OS=Pelagibacter ubique GN=rpoC PE=3 SV=1 | |
| 3 | RPOC_SYNAS | 149 | DNA-directed RNA polymerase subunit beta' OS=Syntrophus aciditrophicus (strain SB) GN=rpoC PE=3 SV=1 | |
| 2 | RPOB_PSEP1 | 316 | DNA-directed RNA polymerase subunit beta OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpoB PE=3 SV=1 | |
6| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL1_PSEE4 | 451 | 50S ribosomal protein L1 OS=Pseudomonas entomophila (strain L48) GN=rplA PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 6.1 | RL1_PSEE4 |
451 | 24208 | 15 (11) | 6 (5) | 0.90 | |
| 50S ribosomal protein L1 OS=Pseudomonas entomophila (strain L48) GN=rplA PE=3 SV=1 | |||||||
| 2 samesets of RL1_PSEE4 | |||||||
| RL1_PSEP1 |
451 | 24236 | 15 (11) | 6 (5) | 0.90 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplA PE=3 SV=1 | |||||||
| RL1_PSEPK |
451 | 24236 | 15 (11) | 6 (5) | 0.90 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain KT2440) GN=rplA PE=3 SV=1 | |||||||
15 peptide matches (11 non-duplicate, 4 duplicate)| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL1_PSEPW |
429 | 24112 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain W619) GN=rplA PE=3 SV=1 | |||||
| 1 sameset of RL1_PSEPW | |||||
| RL1_PSESM |
429 | 24163 | |||
| 50S ribosomal protein L1 OS=Pseudomonas syringae pv. tomato GN=rplA PE=3 SV=1 | |||||
| RL1_PSEPG |
419 | 24180 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain GB-1) GN=rplA PE=3 SV=1 | |||||
| RL1_PSE14 |
398 | 24120 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplA PE=3 SV=1 | |||||
| 2 samesets of RL1_PSE14 | |||||
| RL1_PSEU2 |
398 | 24176 | |||
| 50S ribosomal protein L1 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplA PE=3 SV=1 | |||||
| RL1_PSEF5 |
398 | 24047 | |||
| 50S ribosomal protein L1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplA PE=3 SV=1 | |||||
| RL1_PSEFS |
336 | 24061 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas fluorescens (strain SBW25) GN=rplA PE=3 SV=1 | |||||
| 1 sameset of RL1_PSEFS | |||||
| RL1_PSEPF |
336 | 24193 | |||
| 50S ribosomal protein L1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplA PE=3 SV=1 | |||||
| RL1_AZOVD |
304 | 24230 | 6.1 | ||
| 50S ribosomal protein L1 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rplA PE=3 SV=1 | |||||
| RL1_PSEMY |
151 | 23957 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas mendocina (strain ymp) GN=rplA PE=3 SV=1 | |||||
| 1 sameset of RL1_PSEMY | |||||
| RL1_PSEU5 |
151 | 24129 | |||
| 50S ribosomal protein L1 OS=Pseudomonas stutzeri (strain A1501) GN=rplA PE=3 SV=1 | |||||
| RL1_ACTP2 |
118 | 23932 | 6.1 | ||
| 50S ribosomal protein L1 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rplA PE=3 SV=1 | |||||
| 58 samesets of RL1_ACTP2 |
|||||
| RL1_ACTP7 |
118 | 23932 | |||
| 50S ribosomal protein L1 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rplA PE=3 SV=1 | |||||
| RL1_ACTPJ |
118 | 24005 | |||
| 50S ribosomal protein L1 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rplA PE=3 SV=1 | |||||
| RL1_CELJU |
118 | 24196 | |||
| 50S ribosomal protein L1 OS=Cellvibrio japonicus (strain Ueda107) GN=rplA PE=3 SV=1 | |||||
| RL1_CITK8 |
118 | 24859 | |||
| 50S ribosomal protein L1 OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO24 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO27 |
118 | 24728 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO45 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO55 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain 55989 / EAEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO57 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O157:H7 GN=rplA PE=3 SV=2 | |||||
| RL1_ECO5E |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO7I |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO81 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O81 (strain ED1a) GN=rplA PE=3 SV=1 | |||||
| RL1_ECO8A |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O8 (strain IAI1) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOBW |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain K12 / BW2952) GN=rplA PE=3 SV=1 | |||||
| RL1_ECODH |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain K12 / DH10B) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOHS |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O9:H4 (strain HS) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOL5 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOL6 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O6 GN=rplA PE=3 SV=2 | |||||
| RL1_ECOLC |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOLI |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain K12) GN=rplA PE=1 SV=2 | |||||
| RL1_ECOLU |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOSE |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain SE11) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOSM |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ECOUT |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia coli (strain UTI89 / UPEC) GN=rplA PE=3 SV=1 | |||||
| RL1_ENT38 |
118 | 24637 | |||
| 50S ribosomal protein L1 OS=Enterobacter sp. (strain 638) GN=rplA PE=3 SV=1 | |||||
| RL1_ENTS8 |
118 | 24687 | |||
| 50S ribosomal protein L1 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rplA PE=3 SV=1 | |||||
| RL1_ERWT9 |
118 | 24644 | |||
| 50S ribosomal protein L1 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rplA PE=3 SV=1 | |||||
| RL1_ESCF3 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=rplA PE=3 SV=1 | |||||
| RL1_HAEDU |
118 | 24067 | |||
| 50S ribosomal protein L1 OS=Haemophilus ducreyi GN=rplA PE=3 SV=2 | |||||
| RL1_HAEI8 |
118 | 24092 | |||
| 50S ribosomal protein L1 OS=Haemophilus influenzae (strain 86-028NP) GN=rplA PE=3 SV=1 | |||||
| RL1_HAEIE |
118 | 24120 | |||
| 50S ribosomal protein L1 OS=Haemophilus influenzae (strain PittEE) GN=rplA PE=3 SV=1 | |||||
| RL1_HAEIG |
118 | 24092 | |||
| 50S ribosomal protein L1 OS=Haemophilus influenzae (strain PittGG) GN=rplA PE=3 SV=1 | |||||
| RL1_HAEIN |
118 | 24092 | |||
| 50S ribosomal protein L1 OS=Haemophilus influenzae GN=rplA PE=3 SV=2 | |||||
| RL1_HAEPS |
118 | 23962 | |||
| 50S ribosomal protein L1 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rplA PE=3 SV=1 | |||||
| RL1_KLEP3 |
118 | 24616 | |||
| 50S ribosomal protein L1 OS=Klebsiella pneumoniae (strain 342) GN=rplA PE=3 SV=1 | |||||
| RL1_KLEP7 |
118 | 24729 | |||
| 50S ribosomal protein L1 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rplA PE=3 SV=1 | |||||
| RL1_MANSM |
118 | 23931 | |||
| 50S ribosomal protein L1 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rplA PE=3 SV=1 | |||||
| RL1_PECCP |
118 | 24691 | |||
| 50S ribosomal protein L1 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rplA PE=3 SV=1 | |||||
| RL1_SALA4 |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella agona (strain SL483) GN=rplA PE=3 SV=1 | |||||
| RL1_SALAR |
118 | 24702 | |||
| 50S ribosomal protein L1 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rplA PE=3 SV=1 | |||||
| RL1_SALCH |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella choleraesuis GN=rplA PE=3 SV=1 | |||||
| RL1_SALDC |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella dublin (strain CT_02021853) GN=rplA PE=3 SV=1 | |||||
| RL1_SALEP |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella enteritidis PT4 (strain P125109) GN=rplA PE=3 SV=1 | |||||
| RL1_SALHS |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella heidelberg (strain SL476) GN=rplA PE=3 SV=1 | |||||
| RL1_SALNS |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella newport (strain SL254) GN=rplA PE=3 SV=1 | |||||
| RL1_SALPA |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella paratyphi A GN=rplA PE=3 SV=1 | |||||
| RL1_SALPB |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rplA PE=3 SV=1 | |||||
| RL1_SALPC |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella paratyphi C (strain RKS4594) GN=rplA PE=3 SV=1 | |||||
| RL1_SALPK |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella paratyphi A (strain AKU_12601) GN=rplA PE=3 SV=1 | |||||
| RL1_SALSV |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella schwarzengrund (strain CVM19633) GN=rplA PE=3 SV=1 | |||||
| RL1_SALTI |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella typhi GN=rplA PE=3 SV=1 | |||||
| RL1_SALTY |
118 | 24713 | |||
| 50S ribosomal protein L1 OS=Salmonella typhimurium GN=rplA PE=3 SV=1 | |||||
| RL1_SHIB3 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rplA PE=3 SV=1 | |||||
| RL1_SHIBS |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Shigella boydii serotype 4 (strain Sb227) GN=rplA PE=3 SV=1 | |||||
| RL1_SHIDS |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=rplA PE=3 SV=1 | |||||
| RL1_SHIF8 |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Shigella flexneri serotype 5b (strain 8401) GN=rplA PE=3 SV=1 | |||||
| RL1_SHIFL |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Shigella flexneri GN=rplA PE=3 SV=2 | |||||
| RL1_SHISS |
118 | 24714 | |||
| 50S ribosomal protein L1 OS=Shigella sonnei (strain Ss046) GN=rplA PE=3 SV=1 | |||||
| RL1_ACIAC |
61 | 23909 | 6.1 | ||
| 50S ribosomal protein L1 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rplA PE=3 SV=1 | |||||
| 46 samesets of RL1_ACIAC |
|||||
7| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OTCC_PSEPK | 445 | Ornithine carbamoyltransferase, catabolic OS=Pseudomonas putida (strain KT2440) GN=arcB PE=3 SV=3 |
8| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARCA_PSEPK | 405 | Arginine deiminase OS=Pseudomonas putida (strain KT2440) GN=arcA PE=3 SV=1 |
9| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DLDH2_PSEPU | 387 | Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4 |
10| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DBHB_PSEAE | 318 | DNA-binding protein HU-beta OS=Pseudomonas aeruginosa GN=hupB PE=1 SV=3 |
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