MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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51| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | IDH_AZOVI | 98 | Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd PE=1 SV=5 |
52| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL10_PSEPG | 96 | 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1 |
53| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OPRI_PSEAE | 93 | Major outer membrane lipoprotein OS=Pseudomonas aeruginosa GN=oprI PE=3 SV=1 |
54| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SYA_PSEPG | 92 | Alanyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=alaS PE=3 SV=2 |
55| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPG_PSEPG | 92 | ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 |
56| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL29_PSE14 | 91 | 50S ribosomal protein L29 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpmC PE=3 SV=1 |
57| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CLPB_PSEPK | 90 | Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 57.1 | CLPB_PSEPK |
90 | 94917 | 9 (5) | 6 (3) | 0.10 | |
| Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1 | |||||||
9 peptide matches (7 non-duplicate, 2 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 244 |
544.3484 | 543.3411 | 543.3380 | 5.67 | 0 | 25 | 4.2 | 9Score > 44 indicates identity |
R.QGLVK.E | ||
| 517 |
357.7002 | 713.3858 | 713.3959 | -14.1 | 0 | 9 | 1.5 | 3Score > 38 indicates identity Score > 23 indicates homology |
U | E.LDQLPK.I + Deamidated (NQ) | |
| 2019 |
686.8860 | 1371.7574 | 1371.7398 | 12.8 | 1 | 19 | 1.4 | 2Score > 39 indicates identity Score > 33 indicates homology |
U | R.IDEVVVFEPLGR.E | |
| 2423 |
783.4688 | 1564.9230 | 1564.8977 | 16.2 | 1 | 24 | 0.026 | 1Score > 31 indicates identity Score > 21 indicates homology |
U | R.WIENPLAQLILAGK.F | |
| 2479 |
1 |
793.4329 | 1584.8512 | 1584.8471 | 2.60 | 1 | 29 | 0.032 | 1Score > 39 indicates identity Score > 27 indicates homology |
U | R.VIGQSEAVTAVANAVR.R + Deamidated (NQ) |
| 3092 |
1 |
961.5189 | 1921.0232 | 1921.0058 | 9.10 | 1 | 54 | 0.00035 | 1Score > 37 indicates identity Score > 32 indicates homology |
U | K.AHPDVFNVLLQVLEDGR.L |
| 3094 |
641.3545 | 1921.0417 | 1921.0058 | 18.7 | 1 | 51 | 0.00036 | 1Score > 36 indicates identity Score > 29 indicates homology |
U | K.AHPDVFNVLLQVLEDGR.L |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| CLPB_PSEAE |
24 | 95061 | 57.1 | ||
| Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1 | |||||
58| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPD_PSEPG | 89 | ATP synthase subunit delta OS=Pseudomonas putida (strain GB-1) GN=atpH PE=3 SV=1 |
59| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ILVC_PSEPG | 88 | Ketol-acid reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=ilvC PE=3 SV=1 |
60| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS11_FRATF | 88 | 30S ribosomal protein S11 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rpsK PE=3 SV=1 |
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