MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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51| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | IDH_AZOVI | 98 | Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd PE=1 SV=5 |
52| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL10_PSEPG | 96 | 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1 |
53| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OPRI_PSEAE | 93 | Major outer membrane lipoprotein OS=Pseudomonas aeruginosa GN=oprI PE=3 SV=1 |
54| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SYA_PSEPG | 92 | Alanyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=alaS PE=3 SV=2 |
55| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPG_PSEPG | 92 | ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 55.1 | ATPG_PSEPG |
92 | 31653 | 7 (6) | 6 (5) | 0.42 | |
| ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 | |||||||
| 2 samesets of ATPG_PSEPG | |||||||
| ATPG_PSEPK |
92 | 31558 | 7 (6) | 6 (5) | 0.42 | ||
| ATP synthase gamma chain OS=Pseudomonas putida (strain KT2440) GN=atpG PE=3 SV=1 | |||||||
| ATPG_PSEP1 |
92 | 31558 | 7 (6) | 6 (5) | 0.42 | ||
| ATP synthase gamma chain OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=atpG PE=3 SV=1 | |||||||
7 peptide matches (6 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 578 |
373.7264 | 745.4382 | 745.4334 | 6.51 | 0 | 43 | 0.0064 | 1Score > 39 indicates identity Score > 34 indicates homology |
U | R.LSVVSNK.F | |
| 1210 |
510.7929 | 1019.5712 | 1019.5651 | 6.02 | 1 | 12 | 1.2 | 2Score > 39 indicates identity Score > 25 indicates homology |
K.ELQLIYNK.A | ||
| 1430 |
1 |
566.2867 | 1130.5588 | 1130.5567 | 1.86 | 0 | 43 | 0.004 | 1Score > 41 indicates identity Score > 31 indicates homology |
U | K.NATDNAGDLIK.E |
| 2444 |
525.2438 | 1572.7096 | 1572.6997 | 6.26 | 0 | 26 | 0.017 | 1Score > 39 indicates identity Score > 21 indicates homology |
U | K.HHWDYLYEPDAK.E | |
| 2472 |
527.9445 | 1580.8117 | 1580.8059 | 3.65 | 1 | 37 | 0.012 | 1Score > 40 indicates identity Score > 30 indicates homology |
U | R.QVIGHLANANPEYR.H | |
| 4291 |
976.5325 | 2926.5757 | 2926.5362 | 13.5 | 1 | 35 | 0.00059 | 1Score > 33 indicates identity Score > 15 indicates homology |
U | K.FINTMTQKPTVEQLVPLVATPDQDLK.H + Deamidated (NQ) |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| ATPG_PSEE4 |
66 | 31602 | 55.1 | ||
| ATP synthase gamma chain OS=Pseudomonas entomophila (strain L48) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEMY |
53 | 31680 | 55.1 | ||
| ATP synthase gamma chain OS=Pseudomonas mendocina (strain ymp) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSE14 |
50 | 31458 | 55.1 | ||
| ATP synthase gamma chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=atpG PE=3 SV=1 | |||||
| 5 samesets of ATPG_PSE14 | |||||
| ATPG_PSEFS |
50 | 31488 | |||
| ATP synthase gamma chain OS=Pseudomonas fluorescens (strain SBW25) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEPF |
50 | 31518 | |||
| ATP synthase gamma chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEPW |
50 | 31545 | |||
| ATP synthase gamma chain OS=Pseudomonas putida (strain W619) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEU2 |
50 | 31458 | |||
| ATP synthase gamma chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEF5 |
50 | 31532 | |||
| ATP synthase gamma chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSESM |
42 | 31429 | 55.1 | ||
| ATP synthase gamma chain OS=Pseudomonas syringae pv. tomato GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEA7 |
38 | 31704 | 55.1 | ||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain PA7) GN=atpG PE=3 SV=1 | |||||
| 3 samesets of ATPG_PSEA7 | |||||
| ATPG_PSEAB |
38 | 31704 | |||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEAE |
38 | 31704 | |||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEA8 |
38 | 31704 | |||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain LESB58) GN=atpG PE=3 SV=1 | |||||
56| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL29_PSE14 | 91 | 50S ribosomal protein L29 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpmC PE=3 SV=1 |
57| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CLPB_PSEPK | 90 | Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1 |
58| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPD_PSEPG | 89 | ATP synthase subunit delta OS=Pseudomonas putida (strain GB-1) GN=atpH PE=3 SV=1 |
59| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ILVC_PSEPG | 88 | Ketol-acid reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=ilvC PE=3 SV=1 |
60| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS11_FRATF | 88 | 30S ribosomal protein S11 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rpsK PE=3 SV=1 |
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