MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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41| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PORF_PSEAE | 123 | Outer membrane porin F OS=Pseudomonas aeruginosa GN=oprF PE=1 SV=1 |
42| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLNA_AZOVI | 120 | Glutamine synthetase OS=Azotobacter vinelandii GN=glnA PE=3 SV=1 |
43| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | YJJK_ECOLI | 117 | Uncharacterized ABC transporter ATP-binding protein yjjK OS=Escherichia coli (strain K12) GN=yjjK PE=1 SV=2 |
44| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL21_PSEP1 | 113 | 50S ribosomal protein L21 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplU PE=3 SV=1 |
45| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | YEAG_ECOLI | 109 | Uncharacterized protein yeaG OS=Escherichia coli (strain K12) GN=yeaG PE=3 SV=1 |
46| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODO1_AZOVI | 104 | 2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii GN=sucA PE=3 SV=1 |
47| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL25_PSEPK | 103 | 50S ribosomal protein L25 OS=Pseudomonas putida (strain KT2440) GN=rplY PE=3 SV=2 |
48| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DHSB_ECOLI | 103 | Succinate dehydrogenase iron-sulfur subunit OS=Escherichia coli (strain K12) GN=sdhB PE=1 SV=1 |
49| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL22_PSE14 | 102 | 50S ribosomal protein L22 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplV PE=3 SV=1 |
50| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL6_PSEP1 | 98 | 50S ribosomal protein L6 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplF PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 50.1 | RL6_PSEP1 |
98 | 19131 | 6 (4) | 5 (3) | 0.42 | |
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplF PE=3 SV=1 | |||||||
| 6 samesets of RL6_PSEP1 | |||||||
| RL6_PSEPG |
98 | 19131 | 6 (4) | 5 (3) | 0.42 | ||
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain GB-1) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEPK |
98 | 19131 | 6 (4) | 5 (3) | 0.42 | ||
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain KT2440) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEF5 |
98 | 19170 | 5 (4) | 4 (3) | 0.41 | ||
| 50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEFS |
98 | 19185 | 5 (4) | 4 (3) | 0.41 | ||
| 50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain SBW25) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEPF |
98 | 19184 | 5 (4) | 4 (3) | 0.41 | ||
| 50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEPW |
98 | 19115 | 5 (4) | 4 (3) | 0.42 | ||
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain W619) GN=rplF PE=3 SV=1 | |||||||
6 peptide matches (5 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 747 |
414.7460 | 827.4774 | 827.4753 | 2.64 | 1 | 29 | 0.11 | 1Score > 40 indicates identity Score > 32 indicates homology |
K.LPSGVEVK.F | ||
| 1111 |
1 |
489.2764 | 976.5382 | 976.5342 | 4.17 | 0 | 45 | 0.022 | 1Score > 41 indicates identity |
U | K.FAGQQLSVK.G |
| 1367 |
552.8462 | 1103.6778 | 1103.6703 | 6.86 | 1 | 41 | 0.0048 | 1Score > 30 indicates identity |
U | R.KLQLVGVGYK.A | |
| 1477 |
383.5305 | 1147.5697 | 1147.5662 | 3.03 | 0 | 15 | 0.19 | 1Score > 42 indicates identity Score > 20 indicates homology |
U | R.DFRPPEPYK.G | |
| 1565 |
592.3467 | 1182.6788 | 1182.6721 | 5.74 | 1 | 83 | 1.7e-006 | 1Score > 38 indicates identity |
U | K.QLVGQVAAEIR.D |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL6_PSE14 |
90 | 19506 | 50.1 | ||
| 50S ribosomal protein L6 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplF PE=3 SV=1 | |||||
| 8 samesets of RL6_PSE14 | |||||
| RL6_PSESM |
90 | 19266 | |||
| 50S ribosomal protein L6 OS=Pseudomonas syringae pv. tomato GN=rplF PE=3 SV=1 | |||||
| RL6_PSEU2 |
90 | 19236 | |||
| 50S ribosomal protein L6 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEA7 |
90 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain PA7) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEA8 |
90 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEAB |
90 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEAE |
90 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa GN=rplF PE=3 SV=1 | |||||
| RL6_PSEMY |
90 | 19130 | |||
| 50S ribosomal protein L6 OS=Pseudomonas mendocina (strain ymp) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEU5 |
90 | 19167 | |||
| 50S ribosomal protein L6 OS=Pseudomonas stutzeri (strain A1501) GN=rplF PE=3 SV=1 | |||||
| RL6_CHRVO |
83 | 18841 | 50.1 | ||
| 50S ribosomal protein L6 OS=Chromobacterium violaceum GN=rplF PE=3 SV=1 | |||||
| 3 samesets of RL6_CHRVO | |||||
| RL6_SHELP |
83 | 18777 | |||
| 50S ribosomal protein L6 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rplF PE=3 SV=1 | |||||
| RL6_SHESH |
83 | 18751 | |||
| 50S ribosomal protein L6 OS=Shewanella sediminis (strain HAW-EB3) GN=rplF PE=3 SV=1 | |||||
| RL6_SHEWM |
83 | 18852 | |||
| 50S ribosomal protein L6 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEE4 |
53 | 19015 | 50.1 | ||
| 50S ribosomal protein L6 OS=Pseudomonas entomophila (strain L48) GN=rplF PE=3 SV=1 | |||||
| RL6_ACIB3 |
41 | 19085 | 50.1 | ||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain AB307-0294) GN=rplF PE=3 SV=1 | |||||
| 6 samesets of RL6_ACIB3 | |||||
| RL6_ACIB5 |
41 | 19085 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain AB0057) GN=rplF PE=3 SV=1 | |||||
| RL6_ACIBS |
41 | 19113 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain SDF) GN=rplF PE=3 SV=1 | |||||
| RL6_ACIBT |
41 | 19085 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rplF PE=3 SV=2 | |||||
| RL6_ACIBY |
41 | 19085 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain AYE) GN=rplF PE=3 SV=1 | |||||
| RL6_AERHH |
41 | 18568 | |||
| 50S ribosomal protein L6 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rplF PE=3 SV=1 | |||||
| RL6_AERS4 |
41 | 18556 | |||
| 50S ribosomal protein L6 OS=Aeromonas salmonicida (strain A449) GN=rplF PE=3 SV=1 | |||||
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