MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
Not what you expected? Try 
the select summary.
| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
11| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL11_PSEP1 | 297 | 50S ribosomal protein L11 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplK PE=3 SV=1 |
12| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCC_PSEPK | 292 | Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1 |
13| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFG1_PSEPK | 288 | Elongation factor G 1 OS=Pseudomonas putida (strain KT2440) GN=fusA PE=3 SV=1 |
14| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ADHP_ECOLI | 282 | Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1 |
15| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PORF_PSESY | 281 | Outer membrane porin F OS=Pseudomonas syringae pv. syringae GN=oprF PE=3 SV=1 |
16| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL4_PSEE4 | 276 | 50S ribosomal protein L4 OS=Pseudomonas entomophila (strain L48) GN=rplD PE=3 SV=1 | |
| 2 | RL4_PSE14 | 181 | 50S ribosomal protein L4 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplD PE=3 SV=1 | |
17| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS5_PSEE4 | 265 | 30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 17.1 | RS5_PSEE4 |
265 | 17700 | 10 (7) | 5 (3) | 0.46 | |
| 30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1 | |||||||
| 4 samesets of RS5_PSEE4 | |||||||
| RS5_PSEP1 |
265 | 17712 | 10 (7) | 5 (3) | 0.45 | ||
| 30S ribosomal protein S5 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsE PE=3 SV=1 | |||||||
| RS5_PSEPG |
265 | 17712 | 10 (7) | 5 (3) | 0.45 | ||
| 30S ribosomal protein S5 OS=Pseudomonas putida (strain GB-1) GN=rpsE PE=3 SV=1 | |||||||
| RS5_PSEPK |
265 | 17712 | 10 (7) | 5 (3) | 0.45 | ||
| 30S ribosomal protein S5 OS=Pseudomonas putida (strain KT2440) GN=rpsE PE=3 SV=1 | |||||||
| RS5_PSEPW |
265 | 17712 | 10 (7) | 5 (3) | 0.45 | ||
| 30S ribosomal protein S5 OS=Pseudomonas putida (strain W619) GN=rpsE PE=3 SV=1 | |||||||
10 peptide matches (5 non-duplicate, 5 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 548 |
1 |
364.7256 | 727.4366 | 727.4341 | 3.55 | 0 | 26 | 0.11 | 1Score > 39 indicates identity Score > 29 indicates homology |
K.LVQVNR.V | |
| 812 |
428.2505 | 854.4864 | 854.4861 | 0.35 | 1 | 23 | 0.11 | 1Score > 37 indicates identity Score > 25 indicates homology |
R.EVPAAIQK.A | ||
| 1117 |
1 |
491.7662 | 981.5178 | 981.5131 | 4.83 | 0 | 38 | 0.045 | 1Score > 39 indicates identity Score > 37 indicates homology |
U | K.GTTLQYATK.A |
| 2101 |
1 |
705.9272 | 1409.8398 | 1409.8242 | 11.1 | 1 | 64 | 3.9e-005 | 1Score > 33 indicates identity |
U | R.AVLEVAGVQNVLAK.C |
| 2206 |
2 |
734.9156 | 1467.8166 | 1467.7974 | 13.1 | 0 | 105 | 8.4e-009 | 1Score > 37 indicates identity Score > 36 indicates homology |
U | R.IFTFTALTVVGDGK.G |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RS5_AZOVD |
257 | 17763 | 17.1 | ||
| 30S ribosomal protein S5 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rpsE PE=3 SV=1 | |||||
| 7 samesets of RS5_AZOVD | |||||
| RS5_PSE14 |
257 | 17881 | |||
| 30S ribosomal protein S5 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEF5 |
257 | 17699 | |||
| 30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEFS |
257 | 17732 | |||
| 30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEMY |
257 | 17708 | |||
| 30S ribosomal protein S5 OS=Pseudomonas mendocina (strain ymp) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEPF |
257 | 17769 | |||
| 30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSESM |
257 | 17778 | |||
| 30S ribosomal protein S5 OS=Pseudomonas syringae pv. tomato GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEU2 |
257 | 17778 | |||
| 30S ribosomal protein S5 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEU5 |
207 | 17649 | 17.1 | ||
| 30S ribosomal protein S5 OS=Pseudomonas stutzeri (strain A1501) GN=rpsE PE=3 SV=1 | |||||
| RS5_ALCBS |
81 | 17601 | 17.1 | ||
| 30S ribosomal protein S5 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rpsE PE=3 SV=1 | |||||
| 5 samesets of RS5_ALCBS | |||||
| RS5_PSEA7 |
81 | 17671 | |||
| 30S ribosomal protein S5 OS=Pseudomonas aeruginosa (strain PA7) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEA8 |
81 | 17671 | |||
| 30S ribosomal protein S5 OS=Pseudomonas aeruginosa (strain LESB58) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEAB |
81 | 17671 | |||
| 30S ribosomal protein S5 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rpsE PE=3 SV=1 | |||||
| RS5_PSEAE |
81 | 17671 | |||
| 30S ribosomal protein S5 OS=Pseudomonas aeruginosa GN=rpsE PE=3 SV=1 | |||||
| RS5_HAHCH |
81 | 17639 | |||
| 30S ribosomal protein S5 OS=Hahella chejuensis (strain KCTC 2396) GN=rpsE PE=3 SV=1 | |||||
18| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DHSA_ECOLI | 258 | Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli (strain K12) GN=sdhA PE=1 SV=1 |
19| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOA_PSEPK | 249 | DNA-directed RNA polymerase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=rpoA PE=3 SV=1 |
20| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL18_PSEP1 | 222 | 50S ribosomal protein L18 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplR PE=3 SV=1 |
Not what you expected? Try the select summary.
Mascot: http://www.matrixscience.com/