MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita6 sp |
| MS data file | : | PRT1270_T-BRSC_6_20250714122635.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:38:56 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,869 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
101| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CLPX_VARPS | 50 | ATP-dependent Clp protease ATP-binding subunit clpX OS=Variovorax paradoxus (strain S110) GN=clpX PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 101.1 | CLPX_VARPS |
50 | 46592 | 4 (1) | 3 (1) | 0.05 | |
| ATP-dependent Clp protease ATP-binding subunit clpX OS=Variovorax paradoxus (strain S110) GN=clpX PE=3 SV=1 | |||||||
4 peptide matches (4 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1125 |
494.2988 | 986.5830 | 986.5760 | 7.12 | 0 | 36 | 0.07 | 1Score > 39 indicates identity Score > 37 indicates homology |
K.TLLAQTLAR.M + Deamidated (NQ) | ||
| 1139 |
993.5400 | 992.5327 | 992.5291 | 3.65 | 0 | 50 | 0.0037 | 1Score > 40 indicates identity Score > 38 indicates homology |
U | E.ASGIGFGASVK.S | |
| 1140 |
497.2743 | 992.5340 | 992.5291 | 4.99 | 0 | 18 | 1.4 | 2Score > 40 indicates identity Score > 32 indicates homology |
U | E.ASGIGFGASVK.S | |
| 1759 |
628.8711 | 1255.7276 | 1255.7136 | 11.2 | 0 | 29 | 0.42 | 1Score > 37 indicates identity |
K.SNILLIGPTGSGK.T |
102| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS18_PSEE4 | 50 | 30S ribosomal protein S18 OS=Pseudomonas entomophila (strain L48) GN=rpsR PE=3 SV=1 |
103| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLNA_RHOCA | 49 | Glutamine synthetase (Fragment) OS=Rhodobacter capsulatus GN=glnA PE=3 SV=2 |
104| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CYOB_PSEPU | 49 | Ubiquinol oxidase subunit 1 OS=Pseudomonas putida GN=cyoB PE=3 SV=1 |
105| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFP_PSEPG | 48 | Elongation factor P OS=Pseudomonas putida (strain GB-1) GN=efp PE=3 SV=1 |
106| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DNAB_MYCPN | 48 | Replicative DNA helicase OS=Mycoplasma pneumoniae GN=dnaB PE=1 SV=1 |
107| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACCD_PSEF5 | 48 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=accD PE=3 SV=1 |
108| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP1_MYCTU | 48 | Pyruvate dehydrogenase E1 component OS=Mycobacterium tuberculosis GN=aceE PE=3 SV=1 |
109| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLPD_PSETO | 47 | Glycerol-3-phosphate dehydrogenase OS=Pseudomonas tolaasii GN=glpD PE=3 SV=1 |
110| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFTS_PSEPG | 47 | Elongation factor Ts OS=Pseudomonas putida (strain GB-1) GN=tsf PE=3 SV=1 |
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