MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita5 sp |
| MS data file | : | PRT1270_T-BRSC_5_20250714121805.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:42:02 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,997 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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41| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | HYDA_PSEPU | 128 | D-hydantoinase/dihydropyrimidinase OS=Pseudomonas putida GN=dht PE=1 SV=2 |
42| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS2_PSEP1 | 125 | 30S ribosomal protein S2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsB PE=3 SV=1 |
43| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS16_PSEP1 | 121 | 30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1 |
44| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL25_PSEPK | 117 | 50S ribosomal protein L25 OS=Pseudomonas putida (strain KT2440) GN=rplY PE=3 SV=2 |
45| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | IDH_AZOVI | 117 | Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd PE=1 SV=5 |
46| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLPK_PSEPG | 115 | Glycerol kinase OS=Pseudomonas putida (strain GB-1) GN=glpK PE=3 SV=1 |
47| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ILVC_PSEPG | 113 | Ketol-acid reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=ilvC PE=3 SV=1 |
48| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL11_PSEE4 | 112 | 50S ribosomal protein L11 OS=Pseudomonas entomophila (strain L48) GN=rplK PE=3 SV=1 |
49| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | TIG_PSEPG | 112 | Trigger factor OS=Pseudomonas putida (strain GB-1) GN=tig PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 49.1 | TIG_PSEPG |
112 | 48501 | 4 (3) | 3 (3) | 0.15 | |
| Trigger factor OS=Pseudomonas putida (strain GB-1) GN=tig PE=3 SV=1 | |||||||
| 2 samesets of TIG_PSEPG | |||||||
| TIG_PSEPK |
112 | 48487 | 4 (3) | 3 (3) | 0.15 | ||
| Trigger factor OS=Pseudomonas putida (strain KT2440) GN=tig PE=3 SV=2 | |||||||
| TIG_PSEP1 |
112 | 48429 | 4 (3) | 3 (3) | 0.15 | ||
| Trigger factor OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tig PE=3 SV=1 | |||||||
4 peptide matches (3 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1412 |
582.3282 | 1162.6418 | 1162.6346 | 6.24 | 0 | 48 | 0.00035 | 1Score > 39 indicates identity Score > 26 indicates homology |
U | K.LNPAGAPAVEPK.S | |
| 1597 |
1 |
619.9161 | 1237.8176 | 1237.8010 | 13.5 | 1 | 34 | 0.0019 | 1Score > 19 indicates identity |
U | R.VVLGLIVAEVVK.Q |
| 2439 |
817.3966 | 1632.7786 | 1632.7744 | 2.62 | 0 | 74 | 3.9e-007 | 1Score > 41 indicates identity Score > 23 indicates homology |
U | R.AAQNDDQVNIDFVGK.V |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| TIG_PSEE4 |
60 | 48359 | 49.1 | ||
| Trigger factor OS=Pseudomonas entomophila (strain L48) GN=tig PE=3 SV=1 | |||||
| 2 samesets of TIG_PSEE4 | |||||
| TIG_PSEMY |
60 | 48300 | |||
| Trigger factor OS=Pseudomonas mendocina (strain ymp) GN=tig PE=3 SV=1 | |||||
| TIG_PSEPW |
60 | 48456 | |||
| Trigger factor OS=Pseudomonas putida (strain W619) GN=tig PE=3 SV=1 | |||||
| TIG_PSE14 |
48 | 48654 | 49.1 | ||
| Trigger factor OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tig PE=3 SV=1 | |||||
| 2 samesets of TIG_PSE14 | |||||
| TIG_PSESM |
48 | 48616 | |||
| Trigger factor OS=Pseudomonas syringae pv. tomato GN=tig PE=3 SV=1 | |||||
| TIG_PSEU2 |
48 | 48644 | |||
| Trigger factor OS=Pseudomonas syringae pv. syringae (strain B728a) GN=tig PE=3 SV=1 | |||||
| TIG_PSEA7 |
34 | 48518 | 49.1 | ||
| Trigger factor OS=Pseudomonas aeruginosa (strain PA7) GN=tig PE=3 SV=1 | |||||
| 7 samesets of TIG_PSEA7 | |||||
| TIG_PSEPF |
34 | 48455 | |||
| Trigger factor OS=Pseudomonas fluorescens (strain Pf0-1) GN=tig PE=3 SV=1 | |||||
| TIG_PSEAB |
34 | 48552 | |||
| Trigger factor OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tig PE=3 SV=1 | |||||
| TIG_PSEAE |
34 | 48552 | |||
| Trigger factor OS=Pseudomonas aeruginosa GN=tig PE=3 SV=1 | |||||
| TIG_PSEFS |
34 | 48316 | |||
| Trigger factor OS=Pseudomonas fluorescens (strain SBW25) GN=tig PE=3 SV=1 | |||||
| TIG_PSEF5 |
34 | 48539 | |||
| Trigger factor OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tig PE=3 SV=1 | |||||
| TIG_PSEU5 |
34 | 48281 | |||
| Trigger factor OS=Pseudomonas stutzeri (strain A1501) GN=tig PE=3 SV=1 | |||||
| TIG_PSEA8 |
34 | 48552 | |||
| Trigger factor OS=Pseudomonas aeruginosa (strain LESB58) GN=tig PE=3 SV=1 | |||||
50| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCD_PSEAE | 111 | Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2 |
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