MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita5 sp |
| MS data file | : | PRT1270_T-BRSC_5_20250714121805.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:42:02 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,997 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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41| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | HYDA_PSEPU | 128 | D-hydantoinase/dihydropyrimidinase OS=Pseudomonas putida GN=dht PE=1 SV=2 |
42| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS2_PSEP1 | 125 | 30S ribosomal protein S2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsB PE=3 SV=1 |
43| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS16_PSEP1 | 121 | 30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1 |
44| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL25_PSEPK | 117 | 50S ribosomal protein L25 OS=Pseudomonas putida (strain KT2440) GN=rplY PE=3 SV=2 |
45| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | IDH_AZOVI | 117 | Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd PE=1 SV=5 |
46| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLPK_PSEPG | 115 | Glycerol kinase OS=Pseudomonas putida (strain GB-1) GN=glpK PE=3 SV=1 |
47| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ILVC_PSEPG | 113 | Ketol-acid reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=ilvC PE=3 SV=1 |
48| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL11_PSEE4 | 112 | 50S ribosomal protein L11 OS=Pseudomonas entomophila (strain L48) GN=rplK PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 48.1 | RL11_PSEE4 |
112 | 14940 | 7 (6) | 5 (5) | 1.41 | |
| 50S ribosomal protein L11 OS=Pseudomonas entomophila (strain L48) GN=rplK PE=3 SV=1 | |||||||
| 4 samesets of RL11_PSEE4 | |||||||
| RL11_PSEP1 |
112 | 14914 | 7 (6) | 5 (5) | 1.43 | ||
| 50S ribosomal protein L11 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplK PE=3 SV=1 | |||||||
| RL11_PSEPG |
112 | 14914 | 7 (6) | 5 (5) | 1.43 | ||
| 50S ribosomal protein L11 OS=Pseudomonas putida (strain GB-1) GN=rplK PE=3 SV=1 | |||||||
| RL11_PSEPK |
112 | 14914 | 7 (6) | 5 (5) | 1.43 | ||
| 50S ribosomal protein L11 OS=Pseudomonas putida (strain KT2440) GN=rplK PE=3 SV=1 | |||||||
| RL11_PSEPW |
112 | 14914 | 7 (6) | 5 (5) | 1.43 | ||
| 50S ribosomal protein L11 OS=Pseudomonas putida (strain W619) GN=rplK PE=3 SV=1 | |||||||
7 peptide matches (7 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 727 |
430.2149 | 858.4152 | 858.4123 | 3.39 | 1 | 30 | 0.059 | 1Score > 40 indicates identity Score > 30 indicates homology |
U | R.SFTFETK.S | |
| 790 |
444.2473 | 886.4800 | 886.4760 | 4.60 | 1 | 46 | 0.025 | 1Score > 42 indicates identity |
U | R.AQLEDIAK.A | |
| 860 |
915.5551 | 914.5478 | 914.5437 | 4.54 | 0 | 46 | 0.012 | 1Score > 39 indicates identity |
U | K.STPASVLLK.K | |
| 861 |
458.2829 | 914.5512 | 914.5437 | 8.29 | 0 | 25 | 0.2 | 1Score > 38 indicates identity Score > 30 indicates homology |
U | K.STPASVLLK.K | |
| 1985 |
715.3714 | 1428.7282 | 1428.7209 | 5.17 | 0 | 86 | 4.1e-007 | 1Score > 41 indicates identity Score > 34 indicates homology |
U | K.QADLTAADLDAAVR.T | |
| 1987 |
477.2656 | 1428.7750 | 1428.7685 | 4.55 | 0 | 32 | 0.0066 | 1Score > 40 indicates identity Score > 23 indicates homology |
U | K.AAGLTSGSARPNTVK.V | |
| 1988 |
715.3955 | 1428.7764 | 1428.7685 | 5.58 | 0 | 44 | 0.014 | 1Score > 40 indicates identity Score > 38 indicates homology |
U | K.AAGLTSGSARPNTVK.V |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL11_PSEMY |
107 | 14959 | 48.1 | ||
| 50S ribosomal protein L11 OS=Pseudomonas mendocina (strain ymp) GN=rplK PE=3 SV=1 | |||||
| RL11_CHRVO |
86 | 15002 | 48.1 | ||
| 50S ribosomal protein L11 OS=Chromobacterium violaceum GN=rplK PE=3 SV=1 | |||||
| RL11_PSEA7 |
84 | 14955 | 48.1 | ||
| 50S ribosomal protein L11 OS=Pseudomonas aeruginosa (strain PA7) GN=rplK PE=3 SV=1 | |||||
| 3 samesets of RL11_PSEA7 | |||||
| RL11_PSEA8 |
84 | 14955 | |||
| 50S ribosomal protein L11 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplK PE=3 SV=1 | |||||
| RL11_PSEAB |
84 | 14955 | |||
| 50S ribosomal protein L11 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplK PE=3 SV=1 | |||||
| RL11_PSEAE |
84 | 14955 | |||
| 50S ribosomal protein L11 OS=Pseudomonas aeruginosa GN=rplK PE=3 SV=1 | |||||
| RL11_PSESM |
60 | 14930 | 48.1 | ||
| 50S ribosomal protein L11 OS=Pseudomonas syringae pv. tomato GN=rplK PE=3 SV=1 | |||||
| 1 sameset of RL11_PSESM | |||||
| RL11_PSEU2 |
60 | 14930 | |||
| 50S ribosomal protein L11 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplK PE=3 SV=1 | |||||
| RL11_PSEF5 |
55 | 14960 | 48.1 | ||
| 50S ribosomal protein L11 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplK PE=3 SV=1 | |||||
| 2 samesets of RL11_PSEF5 | |||||
| RL11_PSEFS |
55 | 14960 | |||
| 50S ribosomal protein L11 OS=Pseudomonas fluorescens (strain SBW25) GN=rplK PE=3 SV=1 | |||||
| RL11_PSEPF |
55 | 14934 | |||
| 50S ribosomal protein L11 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplK PE=3 SV=1 | |||||
| RL11_PSE14 |
48 | 14911 | 48.1 | ||
| 50S ribosomal protein L11 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplK PE=3 SV=1 | |||||
| RL11_XANAC |
46 | 14888 | 48.1 | ||
| 50S ribosomal protein L11 OS=Xanthomonas axonopodis pv. citri GN=rplK PE=3 SV=1 | |||||
| 7 samesets of RL11_XANAC | |||||
| RL11_XANC5 |
46 | 14902 | |||
| 50S ribosomal protein L11 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=rplK PE=3 SV=1 | |||||
| RL11_XANC8 |
46 | 14880 | |||
| 50S ribosomal protein L11 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=rplK PE=3 SV=1 | |||||
| RL11_XANCB |
46 | 14852 | |||
| 50S ribosomal protein L11 OS=Xanthomonas campestris pv. campestris (strain B100) GN=rplK PE=3 SV=1 | |||||
| RL11_XANCP |
46 | 14880 | |||
| 50S ribosomal protein L11 OS=Xanthomonas campestris pv. campestris GN=rplK PE=3 SV=1 | |||||
| RL11_XANOM |
46 | 15062 | |||
| 50S ribosomal protein L11 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=rplK PE=3 SV=1 | |||||
| RL11_XANOP |
46 | 15062 | |||
| 50S ribosomal protein L11 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=rplK PE=3 SV=1 | |||||
| RL11_XANOR |
46 | 15062 | |||
| 50S ribosomal protein L11 OS=Xanthomonas oryzae pv. oryzae GN=rplK PE=3 SV=1 | |||||
| RL11_ACIF2 |
46 | 15022 | 48.1 | ||
| 50S ribosomal protein L11 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rplK PE=3 SV=1 | |||||
| 2 samesets of RL11_ACIF2 | |||||
| RL11_ACIF5 |
46 | 15022 | |||
| 50S ribosomal protein L11 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rplK PE=3 SV=1 | |||||
| RL11_PRB01 |
46 | 14968 | |||
| 50S ribosomal protein L11 OS=Gamma-proteobacterium EBAC31A08 GN=rplK PE=3 SV=1 | |||||
| RL11_AZOVD |
42 | 15015 | 48.1 | ||
| 50S ribosomal protein L11 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rplK PE=3 SV=1 | |||||
| RL11_AERHH |
30 | 15094 | 48.1 | ||
| 50S ribosomal protein L11 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rplK PE=3 SV=1 | |||||
| 31 samesets of RL11_AERHH |
|||||
49| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | TIG_PSEPG | 112 | Trigger factor OS=Pseudomonas putida (strain GB-1) GN=tig PE=3 SV=1 |
50| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCD_PSEAE | 111 | Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2 |
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