MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita5 sp |
| MS data file | : | PRT1270_T-BRSC_5_20250714121805.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:42:02 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,997 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | STHA_PSEPG | 155 | Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas putida (strain GB-1) GN=sthA PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GUAA_CELJU | 155 | GMP synthase [glutamine-hydrolyzing] OS=Cellvibrio japonicus (strain Ueda107) GN=guaA PE=3 SV=1 |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PNP_PSEPK | 150 | Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain KT2440) GN=pnp PE=3 SV=1 |
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | AMPA_PSEPG | 149 | Probable cytosol aminopeptidase OS=Pseudomonas putida (strain GB-1) GN=pepA PE=3 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPG_PSEPG | 148 | ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODO2_PSEAE | 136 | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Pseudomonas aeruginosa GN=sucB PE=3 SV=1 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL5_PSEE4 | 134 | 50S ribosomal protein L5 OS=Pseudomonas entomophila (strain L48) GN=rplE PE=3 SV=1 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CISY_PSEAE | 132 | Citrate synthase OS=Pseudomonas aeruginosa GN=gltA PE=3 SV=2 |
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL21_PSEE4 | 130 | 50S ribosomal protein L21 OS=Pseudomonas entomophila (strain L48) GN=rplU PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 39.1 | RL21_PSEE4 |
130 | 11596 | 4 (3) | 3 (2) | 0.76 | |
| 50S ribosomal protein L21 OS=Pseudomonas entomophila (strain L48) GN=rplU PE=3 SV=1 | |||||||
| 4 samesets of RL21_PSEE4 | |||||||
| RL21_PSEP1 |
130 | 11624 | 4 (3) | 3 (2) | 0.76 | ||
| 50S ribosomal protein L21 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplU PE=3 SV=1 | |||||||
| RL21_PSEPG |
130 | 11624 | 4 (3) | 3 (2) | 0.76 | ||
| 50S ribosomal protein L21 OS=Pseudomonas putida (strain GB-1) GN=rplU PE=3 SV=1 | |||||||
| RL21_PSEPK |
130 | 11624 | 4 (3) | 3 (2) | 0.76 | ||
| 50S ribosomal protein L21 OS=Pseudomonas putida (strain KT2440) GN=rplU PE=3 SV=2 | |||||||
| RL21_PSEPW |
130 | 11638 | 4 (3) | 3 (2) | 0.76 | ||
| 50S ribosomal protein L21 OS=Pseudomonas putida (strain W619) GN=rplU PE=3 SV=1 | |||||||
4 peptide matches (4 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 960 |
476.2531 | 950.4916 | 950.4862 | 5.77 | 1 | 24 | 0.63 | 1Score > 41 indicates identity Score > 35 indicates homology |
R.QWFTEIK.I | ||
| 1056 |
994.5604 | 993.5531 | 993.5495 | 3.65 | 0 | 91 | 2.9e-007 | 1Score > 38 indicates identity |
U | M.SYAVIVTGGK.Q | |
| 1057 |
497.7841 | 993.5536 | 993.5495 | 4.17 | 0 | 47 | 0.00077 | 1Score > 38 indicates identity Score > 28 indicates homology |
U | M.SYAVIVTGGK.Q | |
| 1171 |
522.2985 | 1042.5824 | 1042.5771 | 5.11 | 1 | 61 | 0.00022 | 1Score > 41 indicates identity Score > 37 indicates homology |
U | K.VVAEVVSQGR.H |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL21_HAES1 |
61 | 11492 | 39.1 | ||
| 50S ribosomal protein L21 OS=Haemophilus somnus (strain 129Pt) GN=rplU PE=3 SV=1 | |||||
| 2 samesets of RL21_HAES1 | |||||
| RL21_PSEMY |
61 | 11605 | |||
| 50S ribosomal protein L21 OS=Pseudomonas mendocina (strain ymp) GN=rplU PE=3 SV=1 | |||||
| RL21_HAES2 |
61 | 11492 | |||
| 50S ribosomal protein L21 OS=Haemophilus somnus (strain 2336) GN=rplU PE=3 SV=1 | |||||
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL2_PSEP1 | 129 | 50S ribosomal protein L2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplB PE=3 SV=1 |
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