MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita5 sp |
| MS data file | : | PRT1270_T-BRSC_5_20250714121805.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:42:02 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,997 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | STHA_PSEPG | 155 | Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas putida (strain GB-1) GN=sthA PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GUAA_CELJU | 155 | GMP synthase [glutamine-hydrolyzing] OS=Cellvibrio japonicus (strain Ueda107) GN=guaA PE=3 SV=1 |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PNP_PSEPK | 150 | Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain KT2440) GN=pnp PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 33.1 | PNP_PSEPK |
150 | 75192 | 8 (6) | 7 (5) | 0.20 | |
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain KT2440) GN=pnp PE=3 SV=1 | |||||||
| 2 samesets of PNP_PSEPK | |||||||
| PNP_PSEPU |
150 | 75166 | 8 (6) | 7 (5) | 0.20 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida GN=pnp PE=3 SV=1 | |||||||
| PNP_PSEP1 |
150 | 75139 | 8 (6) | 7 (5) | 0.20 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pnp PE=3 SV=1 | |||||||
8 peptide matches (8 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1223 |
538.2999 | 1074.5852 | 1074.5743 | 10.2 | 0 | 18 | 0.17 | 1Score > 40 indicates identity Score > 23 indicates homology |
K.GVTALQMDIK.I | ||
| 1949 |
707.3741 | 1412.7336 | 1412.7082 | 18.0 | 0 | 19 | 1.3 | 3Score > 40 indicates identity Score > 33 indicates homology |
U | K.DGLVHISMLSDAR.V | |
| 2029 |
726.3715 | 1450.7284 | 1450.7245 | 2.72 | 1 | 23 | 0.031 | 1Score > 41 indicates identity Score > 20 indicates homology |
U | K.GFFPLSVHYQEK.T | |
| 2090 |
743.9214 | 1485.8282 | 1485.8151 | 8.84 | 1 | 91 | 2.2e-007 | 1Score > 37 indicates identity |
U | R.GETQALVVATLGTAR.D | |
| 2094 |
745.4352 | 1488.8558 | 1488.8341 | 14.6 | 0 | 44 | 0.00057 | 1Score > 34 indicates identity Score > 25 indicates homology |
U | R.IVDFGAFVNILPGK.D | |
| 2196 |
767.9763 | 1533.9380 | 1533.9243 | 8.99 | 1 | 24 | 0.032 | 1Score > 25 indicates identity Score > 21 indicates homology |
U | K.TVRPLNIEVGVLPK.T | |
| 2197 |
512.3205 | 1533.9397 | 1533.9243 | 10.1 | 1 | 29 | 0.021 | 1Score > 25 indicates identity |
U | K.TVRPLNIEVGVLPK.T | |
| 2520 |
835.9640 | 1669.9134 | 1669.8934 | 12.0 | 0 | 71 | 6.5e-006 | 1Score > 37 indicates identity Score > 31 indicates homology |
U | R.LNILGQMNQVIGQSR.T |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| PNP_PSE14 |
109 | 75121 | 33.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pnp PE=3 SV=1 | |||||
| 8 samesets of PNP_PSE14 | |||||
| PNP_PSEE4 |
109 | 75140 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas entomophila (strain L48) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEFS |
109 | 75117 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEPF |
109 | 75026 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEPG |
109 | 75207 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain GB-1) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEPW |
109 | 75250 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain W619) GN=pnp PE=3 SV=1 | |||||
| PNP_PSESM |
109 | 75108 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syringae pv. tomato GN=pnp PE=3 SV=1 | |||||
| PNP_PSEU2 |
109 | 75123 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEF5 |
109 | 75343 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEA7 |
105 | 75691 | 33.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=pnp PE=3 SV=1 | |||||
| 3 samesets of PNP_PSEA7 | |||||
| PNP_PSEAB |
105 | 75634 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEAE |
105 | 75634 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa GN=pnp PE=3 SV=1 | |||||
| PNP_PSEA8 |
105 | 75634 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=pnp PE=3 SV=1 | |||||
| PNP_AZOVD |
104 | 75912 | 33.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pnp PE=3 SV=1 | |||||
| 2 samesets of PNP_AZOVD | |||||
| PNP_PSEMY |
104 | 75677 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas mendocina (strain ymp) GN=pnp PE=3 SV=2 | |||||
| PNP_PSEU5 |
104 | 75420 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=pnp PE=3 SV=1 | |||||
| PNP_POLNS |
91 | 77289 | 33.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Polynucleobacter necessarius (strain STIR1) GN=pnp PE=3 SV=1 | |||||
| 1 sameset of PNP_POLNS | |||||
| PNP_POLSQ |
91 | 77293 | |||
| Polyribonucleotide nucleotidyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=pnp PE=3 SV=1 | |||||
| PNP_MARAV |
44 | 78217 | 33.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pnp PE=3 SV=1 | |||||
| 13 samesets of PNP_MARAV | |||||
| PNP_PSEHT |
44 | 75667 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEAM |
44 | 75438 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEFN |
44 | 75279 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEON |
44 | 75605 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella oneidensis GN=pnp PE=3 SV=2 | |||||
| PNP_SHEPC |
44 | 75520 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESA |
44 | 75432 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain ANA-3) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESM |
44 | 75355 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain MR-4) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESR |
44 | 75341 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain MR-7) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESW |
44 | 75520 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain W3-18-1) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEB2 |
44 | 75322 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS223) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEB5 |
44 | 75393 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pnp PE=3 SV=2 | |||||
| PNP_SHEB8 |
44 | 75363 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS185) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEB9 |
44 | 75393 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS195) GN=pnp PE=3 SV=1 | |||||
| PNP_TERTT |
24 | 76334 | 33.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=pnp PE=3 SV=1 | |||||
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | AMPA_PSEPG | 149 | Probable cytosol aminopeptidase OS=Pseudomonas putida (strain GB-1) GN=pepA PE=3 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPG_PSEPG | 148 | ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODO2_PSEAE | 136 | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Pseudomonas aeruginosa GN=sucB PE=3 SV=1 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL5_PSEE4 | 134 | 50S ribosomal protein L5 OS=Pseudomonas entomophila (strain L48) GN=rplE PE=3 SV=1 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CISY_PSEAE | 132 | Citrate synthase OS=Pseudomonas aeruginosa GN=gltA PE=3 SV=2 |
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL21_PSEE4 | 130 | 50S ribosomal protein L21 OS=Pseudomonas entomophila (strain L48) GN=rplU PE=3 SV=1 |
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL2_PSEP1 | 129 | 50S ribosomal protein L2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplB PE=3 SV=1 |
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