MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita5 sp |
| MS data file | : | PRT1270_T-BRSC_5_20250714121805.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:42:02 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,997 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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21| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DLDH2_PSEPU | 211 | Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4 |
22| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL18_PSEP1 | 196 | 50S ribosomal protein L18 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplR PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 22.1 | RL18_PSEP1 |
196 | 12677 | 5 (4) | 4 (3) | 1.00 | |
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplR PE=3 SV=1 | |||||||
| 3 samesets of RL18_PSEP1 | |||||||
| RL18_PSEPG |
196 | 12677 | 5 (4) | 4 (3) | 1.00 | ||
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain GB-1) GN=rplR PE=3 SV=1 | |||||||
| RL18_PSEPK |
196 | 12677 | 5 (4) | 4 (3) | 1.00 | ||
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain KT2440) GN=rplR PE=3 SV=1 | |||||||
| RL18_PSEPW |
196 | 12665 | 5 (4) | 4 (3) | 1.00 | ||
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain W619) GN=rplR PE=3 SV=1 | |||||||
5 peptide matches (5 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1083 |
502.7782 | 1003.5418 | 1003.5550 | -13.1 | 0 | 22 | 0.93 | 1Score > 41 indicates identity Score > 34 indicates homology |
K.VLASASTLDK.D | ||
| 1301 |
560.7947 | 1119.5748 | 1119.5673 | 6.76 | 0 | 61 | 0.00017 | 1Score > 42 indicates identity Score > 35 indicates homology |
U | K.AAGVSQVAFDR.S | |
| 1335 |
567.2786 | 1132.5426 | 1132.5360 | 5.85 | 0 | 53 | 0.00037 | 1Score > 41 indicates identity Score > 31 indicates homology |
U | R.DGATGNIDAATK.V | |
| 1893 |
463.5982 | 1387.7728 | 1387.7671 | 4.11 | 1 | 91 | 1.3e-007 | 1Score > 38 indicates identity Score > 35 indicates homology |
U | K.VLASASTLDKDLR.D | |
| 1894 |
694.8939 | 1387.7732 | 1387.7671 | 4.45 | 1 | 96 | 8.7e-008 | 1Score > 38 indicates identity |
U | K.VLASASTLDKDLR.D |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL18_PSEA7 |
151 | 12711 | 22.1 | ||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa (strain PA7) GN=rplR PE=3 SV=1 | |||||
| 4 samesets of RL18_PSEA7 | |||||
| RL18_TERTT |
151 | 12760 | |||
| 50S ribosomal protein L18 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEA8 |
151 | 12711 | |||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEAB |
151 | 12711 | |||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEAE |
151 | 12711 | |||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa GN=rplR PE=3 SV=1 | |||||
| RL18_PSE14 |
80 | 12653 | 22.1 | ||
| 50S ribosomal protein L18 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplR PE=3 SV=1 | |||||
| 6 samesets of RL18_PSE14 | |||||
| RL18_PSEE4 |
80 | 12651 | |||
| 50S ribosomal protein L18 OS=Pseudomonas entomophila (strain L48) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEF5 |
80 | 12692 | |||
| 50S ribosomal protein L18 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEFS |
80 | 12708 | |||
| 50S ribosomal protein L18 OS=Pseudomonas fluorescens (strain SBW25) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEPF |
80 | 12692 | |||
| 50S ribosomal protein L18 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplR PE=3 SV=1 | |||||
| RL18_PSESM |
80 | 12653 | |||
| 50S ribosomal protein L18 OS=Pseudomonas syringae pv. tomato GN=rplR PE=3 SV=1 | |||||
| RL18_PSEU2 |
80 | 12653 | |||
| 50S ribosomal protein L18 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplR PE=3 SV=1 | |||||
23| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPF_PSEPK | 187 | ATP synthase subunit b OS=Pseudomonas putida (strain KT2440) GN=atpF PE=3 SV=1 |
24| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP2_PSEAE | 183 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Pseudomonas aeruginosa GN=aceF PE=3 SV=2 |
25| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | KATG_PSEPK | 181 | Catalase-peroxidase OS=Pseudomonas putida (strain KT2440) GN=katG PE=3 SV=1 |
26| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL3_PSEP1 | 177 | 50S ribosomal protein L3 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplC PE=3 SV=1 |
27| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOA_PSEPK | 167 | DNA-directed RNA polymerase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=rpoA PE=3 SV=1 |
28| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL4_PSE14 | 163 | 50S ribosomal protein L4 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplD PE=3 SV=1 |
29| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLNA_AZOVI | 158 | Glutamine synthetase OS=Azotobacter vinelandii GN=glnA PE=3 SV=1 |
30| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACCA_PSEPK | 158 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=accA PE=3 SV=1 |
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