MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita5 sp |
| MS data file | : | PRT1270_T-BRSC_5_20250714121805.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:42:02 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,997 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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141| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RAVA_ECOBW | 45 | ATPase ravA OS=Escherichia coli (strain K12 / BW2952) GN=ravA PE=3 SV=1 |
142| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | TILS_ACTPJ | 44 | tRNA(Ile)-lysidine synthase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tilS PE=3 SV=1 |
143| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SYFB_METLZ | 44 | Phenylalanyl-tRNA synthetase beta chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheT PE=3 SV=1 |
144| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | HFQ_PSEPK | 44 | Protein hfq OS=Pseudomonas putida (strain KT2440) GN=hfq PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 144.1 | HFQ_PSEPK |
44 | 9456 | 3 (2) | 3 (2) | 0.58 | |
| Protein hfq OS=Pseudomonas putida (strain KT2440) GN=hfq PE=3 SV=1 | |||||||
| 1 sameset of HFQ_PSEPK | |||||||
| HFQ_PSEP1 |
44 | 9456 | 3 (2) | 3 (2) | 0.58 | ||
| Protein hfq OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hfq PE=3 SV=1 | |||||||
3 peptide matches (3 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1928 |
468.2826 | 1401.8260 | 1401.8205 | 3.93 | 0 | 43 | 0.005 | 1Score > 33 indicates identity Score > 32 indicates homology |
U | K.HAISTVVPARPVR.L | |
| 2152 |
505.2641 | 1512.7705 | 1512.7685 | 1.32 | 0 | 21 | 0.5 | 1Score > 40 indicates identity Score > 30 indicates homology |
K.GHSLQDPYLNTLR.K | ||
| 2585 |
855.3690 | 1708.7234 | 1708.7176 | 3.40 | 1 | 31 | 0.026 | 1Score > 36 indicates identity Score > 28 indicates homology |
U | R.LPSPTDSEHGDSEPGNA.- |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| HFQ_PSEE4 |
43 | 9467 | 144.1 | ||
| Protein hfq OS=Pseudomonas entomophila (strain L48) GN=hfq PE=3 SV=1 | |||||
| 2 samesets of HFQ_PSEE4 | |||||
| HFQ_PSEPG |
43 | 9426 | |||
| Protein hfq OS=Pseudomonas putida (strain GB-1) GN=hfq PE=3 SV=1 | |||||
| HFQ_PSEPW |
43 | 9442 | |||
| Protein hfq OS=Pseudomonas putida (strain W619) GN=hfq PE=3 SV=1 | |||||
145| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GCH1_PORG3 | 44 | GTP cyclohydrolase 1 OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=folE PE=3 SV=1 |
146| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFP_PSEPG | 43 | Elongation factor P OS=Pseudomonas putida (strain GB-1) GN=efp PE=3 SV=1 |
147| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | YLF8_SCHPO | 43 | UPF0662 protein C30C2.08 OS=Schizosaccharomyces pombe GN=SPAC30C2.08 PE=2 SV=1 |
148| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCC_COXBN | 43 | Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii (strain Dugway 5J108-111) GN=sucC PE=3 SV=1 |
149| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ETFA_PSEAE | 43 | Electron transfer flavoprotein subunit alpha OS=Pseudomonas aeruginosa GN=etfA PE=3 SV=1 |
150| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PYRD_SACKL | 43 | Dihydroorotate dehydrogenase, mitochondrial OS=Saccharomyces kluyveri GN=URA9 PE=1 SV=1 |
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