MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita4 sp |
| MS data file | : | PRT1270_T-BRSC_4_20250714120925.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:34 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,786 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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81| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | IDH_AZOVI | 59 | Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd PE=1 SV=5 |
82| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL28_PSEE4 | 58 | 50S ribosomal protein L28 OS=Pseudomonas entomophila (strain L48) GN=rpmB PE=3 SV=1 |
83| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCC_COXBN | 58 | Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii (strain Dugway 5J108-111) GN=sucC PE=3 SV=1 |
84| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CLPB_PSEPK | 57 | Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1 |
85| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RDRP_ACLSA | 57 | RNA-directed RNA polymerase OS=Apple chlorotic leaf spot virus (isolate apple) PE=4 SV=1 |
86| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPE_PSEPG | 57 | ATP synthase epsilon chain OS=Pseudomonas putida (strain GB-1) GN=atpC PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 86.1 | ATPE_PSEPG |
57 | 14606 | 4 (2) | 3 (2) | 0.35 | |
| ATP synthase epsilon chain OS=Pseudomonas putida (strain GB-1) GN=atpC PE=3 SV=1 | |||||||
| 2 samesets of ATPE_PSEPG | |||||||
| ATPE_PSEPK |
57 | 14585 | 4 (2) | 3 (2) | 0.35 | ||
| ATP synthase epsilon chain OS=Pseudomonas putida (strain KT2440) GN=atpC PE=3 SV=1 | |||||||
| ATPE_PSEPW |
57 | 14595 | 4 (2) | 3 (2) | 0.35 | ||
| ATP synthase epsilon chain OS=Pseudomonas putida (strain W619) GN=atpC PE=3 SV=1 | |||||||
4 peptide matches (3 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 926 |
451.2578 | 900.5010 | 900.5029 | -2.04 | 0 | 36 | 0.13 | 1Score > 42 indicates identity Score > 39 indicates homology |
U | K.VLADTVQR.A | |
| 1023 |
1 |
471.7742 | 941.5338 | 941.5294 | 4.74 | 1 | 45 | 0.015 | 1Score > 39 indicates identity |
U | R.LAEAAAQLR.T |
| 1588 |
592.7713 | 1183.5280 | 1183.5258 | 1.91 | 0 | 50 | 0.0033 | 1Score > 39 indicates identity Score > 38 indicates homology |
U | K.GADFDYGAAAAR.L |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| ATPE_COXB1 |
45 | 15277 | 86.1 | ||
| ATP synthase epsilon chain OS=Coxiella burnetii (strain CbuK_Q154) GN=atpC PE=3 SV=1 | |||||
| 19 samesets of ATPE_COXB1 | |||||
| ATPE_PSEFS |
45 | 14615 | |||
| ATP synthase epsilon chain OS=Pseudomonas fluorescens (strain SBW25) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEPF |
45 | 14802 | |||
| ATP synthase epsilon chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSESM |
45 | 14607 | |||
| ATP synthase epsilon chain OS=Pseudomonas syringae pv. tomato GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEP1 |
45 | 14636 | |||
| ATP synthase epsilon chain OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEU2 |
45 | 14794 | |||
| ATP synthase epsilon chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEE4 |
45 | 14635 | |||
| ATP synthase epsilon chain OS=Pseudomonas entomophila (strain L48) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEF5 |
45 | 14853 | |||
| ATP synthase epsilon chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSE14 |
45 | 14794 | |||
| ATP synthase epsilon chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=atpC PE=3 SV=1 | |||||
| ATPE_MARAV |
45 | 15117 | |||
| ATP synthase epsilon chain OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=atpC PE=3 SV=1 | |||||
| ATPE_COXBN |
45 | 15277 | |||
| ATP synthase epsilon chain OS=Coxiella burnetii (strain Dugway 5J108-111) GN=atpC PE=3 SV=1 | |||||
| ATPE_COXBR |
45 | 15277 | |||
| ATP synthase epsilon chain OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=atpC PE=3 SV=1 | |||||
| ATPE_COXBU |
45 | 15277 | |||
| ATP synthase epsilon chain OS=Coxiella burnetii GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEAB |
45 | 14774 | |||
| ATP synthase epsilon chain OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEAE |
45 | 14774 | |||
| ATP synthase epsilon chain OS=Pseudomonas aeruginosa GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEMY |
45 | 15370 | |||
| ATP synthase epsilon chain OS=Pseudomonas mendocina (strain ymp) GN=atpC PE=3 SV=1 | |||||
| ATPE_TERTT |
45 | 14938 | |||
| ATP synthase epsilon chain OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=atpC PE=3 SV=1 | |||||
| ATPE_COXB2 |
45 | 15277 | |||
| ATP synthase epsilon chain OS=Coxiella burnetii (strain CbuG_Q212) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEA7 |
45 | 14774 | |||
| ATP synthase epsilon chain OS=Pseudomonas aeruginosa (strain PA7) GN=atpC PE=3 SV=1 | |||||
| ATPE_PSEA8 |
45 | 14774 | |||
| ATP synthase epsilon chain OS=Pseudomonas aeruginosa (strain LESB58) GN=atpC PE=3 SV=1 | |||||
87| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PUR5_PSEMY | 55 | Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudomonas mendocina (strain ymp) GN=purM PE=3 SV=1 |
88| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS9_PSEE4 | 54 | 30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1 |
89| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARGJ_OCEIH | 53 | Arginine biosynthesis bifunctional protein argJ OS=Oceanobacillus iheyensis GN=argJ PE=3 SV=1 |
90| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL23_PSEE4 | 53 | 50S ribosomal protein L23 OS=Pseudomonas entomophila (strain L48) GN=rplW PE=3 SV=1 |
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