MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita4 sp |
| MS data file | : | PRT1270_T-BRSC_4_20250714120925.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:34 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,786 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
71| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPG_PSEPG | 70 | ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 71.1 | ATPG_PSEPG |
70 | 31653 | 6 (5) | 5 (4) | 0.33 | |
| ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 | |||||||
| 2 samesets of ATPG_PSEPG | |||||||
| ATPG_PSEPK |
70 | 31558 | 6 (5) | 5 (4) | 0.33 | ||
| ATP synthase gamma chain OS=Pseudomonas putida (strain KT2440) GN=atpG PE=3 SV=1 | |||||||
| ATPG_PSEP1 |
70 | 31558 | 6 (5) | 5 (4) | 0.33 | ||
| ATP synthase gamma chain OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=atpG PE=3 SV=1 | |||||||
6 peptide matches (5 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 605 |
373.7260 | 745.4374 | 745.4334 | 5.44 | 0 | 34 | 0.045 | 1Score > 39 indicates identity Score > 33 indicates homology |
U | R.LSVVSNK.F | |
| 1226 |
510.7931 | 1019.5716 | 1019.5651 | 6.41 | 1 | 20 | 0.22 | 1Score > 38 indicates identity Score > 26 indicates homology |
K.ELQLIYNK.A | ||
| 1452 |
1 |
566.2868 | 1130.5590 | 1130.5567 | 2.04 | 0 | 46 | 0.0011 | 1Score > 41 indicates identity Score > 29 indicates homology |
U | K.NATDNAGDLIK.E |
| 2411 |
525.2447 | 1572.7123 | 1572.6997 | 7.98 | 0 | 22 | 0.036 | 1Score > 39 indicates identity Score > 20 indicates homology |
U | K.HHWDYLYEPDAK.E | |
| 2437 |
527.9447 | 1580.8123 | 1580.8059 | 4.03 | 1 | 40 | 0.0013 | 1Score > 40 indicates identity Score > 24 indicates homology |
U | R.QVIGHLANANPEYR.H |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| ATPG_PSEMY |
53 | 31680 | 71.1 | ||
| ATP synthase gamma chain OS=Pseudomonas mendocina (strain ymp) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSE14 |
45 | 31458 | 71.1 | ||
| ATP synthase gamma chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=atpG PE=3 SV=1 | |||||
| 6 samesets of ATPG_PSE14 | |||||
| ATPG_PSEFS |
45 | 31488 | |||
| ATP synthase gamma chain OS=Pseudomonas fluorescens (strain SBW25) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEPF |
45 | 31518 | |||
| ATP synthase gamma chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEPW |
45 | 31545 | |||
| ATP synthase gamma chain OS=Pseudomonas putida (strain W619) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEU2 |
45 | 31458 | |||
| ATP synthase gamma chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEE4 |
45 | 31602 | |||
| ATP synthase gamma chain OS=Pseudomonas entomophila (strain L48) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEF5 |
45 | 31532 | |||
| ATP synthase gamma chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEA7 |
41 | 31704 | 71.1 | ||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain PA7) GN=atpG PE=3 SV=1 | |||||
| 3 samesets of ATPG_PSEA7 | |||||
| ATPG_PSEAB |
41 | 31704 | |||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEAE |
41 | 31704 | |||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa GN=atpG PE=3 SV=1 | |||||
| ATPG_PSEA8 |
41 | 31704 | |||
| ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain LESB58) GN=atpG PE=3 SV=1 | |||||
| ATPG_PSESM |
29 | 31429 | 71.1 | ||
| ATP synthase gamma chain OS=Pseudomonas syringae pv. tomato GN=atpG PE=3 SV=1 | |||||
72| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | HYDA_PSEAE | 69 | D-hydantoinase/dihydropyrimidinase OS=Pseudomonas aeruginosa GN=dht PE=3 SV=1 |
73| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL10_PSEPG | 69 | 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1 |
74| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL15_PSEP1 | 67 | 50S ribosomal protein L15 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplO PE=3 SV=1 |
75| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL14_AZOSE | 61 | 50S ribosomal protein L14 OS=Azoarcus sp. (strain EbN1) GN=rplN PE=3 SV=1 |
76| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP1_MYCTU | 66 | Pyruvate dehydrogenase E1 component OS=Mycobacterium tuberculosis GN=aceE PE=3 SV=1 |
77| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PURA_PSEPG | 64 | Adenylosuccinate synthetase OS=Pseudomonas putida (strain GB-1) GN=purA PE=3 SV=1 |
78| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SYD_AZOVD | 62 | Aspartyl-tRNA synthetase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=aspS PE=3 SV=1 |
79| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLNA_AZOVI | 62 | Glutamine synthetase OS=Azotobacter vinelandii GN=glnA PE=3 SV=1 |
80| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CH10_PSE14 | 61 | 10 kDa chaperonin OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=groS PE=3 SV=1 |
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