MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita4 sp |
| MS data file | : | PRT1270_T-BRSC_4_20250714120925.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:34 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,786 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RISB_PSEPG | 138 | 6,7-dimethyl-8-ribityllumazine synthase OS=Pseudomonas putida (strain GB-1) GN=ribH PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARPC_PSEPU | 136 | Antibiotic efflux pump outer membrane protein arpC OS=Pseudomonas putida GN=arpC PE=2 SV=1 |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PNP_PSEPG | 134 | Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain GB-1) GN=pnp PE=3 SV=1 |
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SAHH_PSEP1 | 130 | Adenosylhomocysteinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ahcY PE=3 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPD_PSEPG | 129 | ATP synthase subunit delta OS=Pseudomonas putida (strain GB-1) GN=atpH PE=3 SV=1 |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPF_PSEPK | 127 | ATP synthase subunit b OS=Pseudomonas putida (strain KT2440) GN=atpF PE=3 SV=1 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP2_PSEAE | 124 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Pseudomonas aeruginosa GN=aceF PE=3 SV=2 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | LEU1_PSEP1 | 124 | 2-isopropylmalate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=leuA PE=3 SV=1 |
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS16_PSEP1 | 116 | 30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1 |
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL3_PSEE4 | 112 | 50S ribosomal protein L3 OS=Pseudomonas entomophila (strain L48) GN=rplC PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 40.1 | RL3_PSEE4 |
112 | 22600 | 8 (4) | 5 (2) | 0.34 | |
| 50S ribosomal protein L3 OS=Pseudomonas entomophila (strain L48) GN=rplC PE=3 SV=1 | |||||||
| 4 samesets of RL3_PSEE4 | |||||||
| RL3_PSEP1 |
112 | 22703 | 8 (4) | 5 (2) | 0.34 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplC PE=3 SV=1 | |||||||
| RL3_PSEPG |
112 | 22703 | 8 (4) | 5 (2) | 0.34 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain GB-1) GN=rplC PE=3 SV=1 | |||||||
| RL3_PSEPK |
112 | 22703 | 8 (4) | 5 (2) | 0.34 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain KT2440) GN=rplC PE=3 SV=2 | |||||||
| RL3_PSEPW |
112 | 22663 | 8 (4) | 5 (2) | 0.34 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain W619) GN=rplC PE=3 SV=1 | |||||||
8 peptide matches (6 non-duplicate, 2 duplicate)| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL3_ACTP2 |
56 | 22369 | 40.1 | ||
| 50S ribosomal protein L3 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rplC PE=3 SV=1 | |||||
| 17 samesets of RL3_ACTP2 | |||||
| RL3_PSEF5 |
56 | 22646 | |||
| 50S ribosomal protein L3 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplC PE=3 SV=1 | |||||
| RL3_PSEFS |
56 | 22664 | |||
| 50S ribosomal protein L3 OS=Pseudomonas fluorescens (strain SBW25) GN=rplC PE=3 SV=1 | |||||
| RL3_PSEPF |
56 | 22603 | |||
| 50S ribosomal protein L3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplC PE=3 SV=1 | |||||
| RL3_PSESM |
56 | 22707 | |||
| 50S ribosomal protein L3 OS=Pseudomonas syringae pv. tomato GN=rplC PE=3 SV=1 | |||||
| RL3_PSEU2 |
56 | 22693 | |||
| 50S ribosomal protein L3 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplC PE=3 SV=1 | |||||
| RL3_PSEMY |
56 | 22536 | |||
| 50S ribosomal protein L3 OS=Pseudomonas mendocina (strain ymp) GN=rplC PE=3 SV=1 | |||||
| RL3_ACTP7 |
56 | 22369 | |||
| 50S ribosomal protein L3 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rplC PE=3 SV=1 | |||||
| RL3_ACTPJ |
56 | 22369 | |||
| 50S ribosomal protein L3 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rplC PE=3 SV=1 | |||||
| RL3_ACTSZ |
56 | 22312 | |||
| 50S ribosomal protein L3 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rplC PE=3 SV=1 | |||||
| RL3_AGGAC |
56 | 12929 | |||
| 50S ribosomal protein L3 (Fragment) OS=Aggregatibacter actinomycetemcomitans GN=rplC PE=3 SV=1 | |||||
| RL3_HAEDU |
56 | 22295 | |||
| 50S ribosomal protein L3 OS=Haemophilus ducreyi GN=rplC PE=3 SV=1 | |||||
| RL3_HAEI8 |
56 | 22350 | |||
| 50S ribosomal protein L3 OS=Haemophilus influenzae (strain 86-028NP) GN=rplC PE=3 SV=1 | |||||
| RL3_HAEIG |
56 | 22349 | |||
| 50S ribosomal protein L3 OS=Haemophilus influenzae (strain PittGG) GN=rplC PE=3 SV=1 | |||||
| RL3_HAEIN |
56 | 22350 | |||
| 50S ribosomal protein L3 OS=Haemophilus influenzae GN=rplC PE=3 SV=1 | |||||
| RL3_HAEPS |
56 | 22385 | |||
| 50S ribosomal protein L3 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rplC PE=3 SV=1 | |||||
| RL3_MANSM |
56 | 22326 | |||
| 50S ribosomal protein L3 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rplC PE=3 SV=1 | |||||
| RL3_PASMU |
56 | 22369 | |||
| 50S ribosomal protein L3 OS=Pasteurella multocida GN=rplC PE=3 SV=1 | |||||
| RL3_BUCA5 |
51 | 22903 | 40.1 | ||
| 50S ribosomal protein L3 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rplC PE=3 SV=1 | |||||
| 3 samesets of RL3_BUCA5 | |||||
| RL3_BUCAI |
51 | 22884 | |||
| 50S ribosomal protein L3 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rplC PE=3 SV=1 | |||||
| RL3_BUCAT |
51 | 22903 | |||
| 50S ribosomal protein L3 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rplC PE=3 SV=1 | |||||
| RL3_TOLAT |
51 | 22710 | |||
| 50S ribosomal protein L3 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rplC PE=3 SV=1 | |||||
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