MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita4 sp |
| MS data file | : | PRT1270_T-BRSC_4_20250714120925.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:34 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,786 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RISB_PSEPG | 138 | 6,7-dimethyl-8-ribityllumazine synthase OS=Pseudomonas putida (strain GB-1) GN=ribH PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARPC_PSEPU | 136 | Antibiotic efflux pump outer membrane protein arpC OS=Pseudomonas putida GN=arpC PE=2 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 32.1 | ARPC_PSEPU |
136 | 52859 | 3 (2) | 3 (2) | 0.09 | |
| Antibiotic efflux pump outer membrane protein arpC OS=Pseudomonas putida GN=arpC PE=2 SV=1 | |||||||
| 3 samesets of ARPC_PSEPU | |||||||
| MEPC_PSEPU |
136 | 52889 | 3 (2) | 3 (2) | 0.09 | ||
| Multidrug/solvent efflux pump outer membrane protein mepC OS=Pseudomonas putida GN=mepC PE=1 SV=1 | |||||||
| TTGC_PSEPK |
136 | 52889 | 3 (2) | 3 (2) | 0.09 | ||
| Probable efflux pump outer membrane protein ttgC OS=Pseudomonas putida (strain KT2440) GN=ttgC PE=1 SV=1 | |||||||
| TTGC_PSEPU |
136 | 52873 | 3 (2) | 3 (2) | 0.09 | ||
| Toluene efflux pump outer membrane protein ttgC OS=Pseudomonas putida GN=ttgC PE=2 SV=1 | |||||||
3 peptide matches (3 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 2134 |
716.8880 | 1431.7614 | 1431.7470 | 10.1 | 0 | 72 | 3.9e-005 | 1Score > 40 indicates identity |
U | R.NLFSAQQALIGDR.L | |
| 2137 |
718.3666 | 1434.7186 | 1434.7103 | 5.81 | 0 | 16 | 0.33 | 1Score > 41 indicates identity Score > 24 indicates homology |
U | R.ADLFPAVSATGSGSR.Q | |
| 2388 |
781.9261 | 1561.8376 | 1561.8100 | 17.7 | 0 | 104 | 1.7e-008 | 1Score > 39 indicates identity |
U | R.IGIDSNLTFLDAQR.N |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PNP_PSEPG | 134 | Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain GB-1) GN=pnp PE=3 SV=1 |
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SAHH_PSEP1 | 130 | Adenosylhomocysteinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ahcY PE=3 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPD_PSEPG | 129 | ATP synthase subunit delta OS=Pseudomonas putida (strain GB-1) GN=atpH PE=3 SV=1 |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPF_PSEPK | 127 | ATP synthase subunit b OS=Pseudomonas putida (strain KT2440) GN=atpF PE=3 SV=1 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP2_PSEAE | 124 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Pseudomonas aeruginosa GN=aceF PE=3 SV=2 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | LEU1_PSEP1 | 124 | 2-isopropylmalate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=leuA PE=3 SV=1 |
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS16_PSEP1 | 116 | 30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1 |
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL3_PSEE4 | 112 | 50S ribosomal protein L3 OS=Pseudomonas entomophila (strain L48) GN=rplC PE=3 SV=1 |
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