MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita4 sp |
| MS data file | : | PRT1270_T-BRSC_4_20250714120925.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:34 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,786 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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21| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOB_PSEPG | 190 | DNA-directed RNA polymerase subunit beta OS=Pseudomonas putida (strain GB-1) GN=rpoB PE=3 SV=1 |
22| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODO2_PSEAE | 190 | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Pseudomonas aeruginosa GN=sucB PE=3 SV=1 |
23| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODB2_PSEPU | 180 | Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB PE=3 SV=1 |
24| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL5_PSEE4 | 176 | 50S ribosomal protein L5 OS=Pseudomonas entomophila (strain L48) GN=rplE PE=3 SV=1 |
25| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL2_PSEP1 | 172 | 50S ribosomal protein L2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplB PE=3 SV=1 |
26| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | TIG_PSEPK | 156 | Trigger factor OS=Pseudomonas putida (strain KT2440) GN=tig PE=3 SV=2 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 26.1 | TIG_PSEPK |
156 | 48487 | 6 (3) | 5 (3) | 0.15 | |
| Trigger factor OS=Pseudomonas putida (strain KT2440) GN=tig PE=3 SV=2 | |||||||
| 2 samesets of TIG_PSEPK | |||||||
| TIG_PSEP1 |
156 | 48429 | 6 (3) | 5 (3) | 0.15 | ||
| Trigger factor OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tig PE=3 SV=1 | |||||||
| TIG_PSEPG |
156 | 48501 | 5 (3) | 4 (3) | 0.15 | ||
| Trigger factor OS=Pseudomonas putida (strain GB-1) GN=tig PE=3 SV=1 | |||||||
6 peptide matches (5 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1114 |
486.7993 | 971.5840 | 971.5764 | 7.89 | 0 | 36 | 0.098 | 2Score > 39 indicates identity |
K.GTLLVLGSGR.M | ||
| 1536 |
582.3273 | 1162.6400 | 1162.6346 | 4.69 | 0 | 42 | 0.0018 | 1Score > 39 indicates identity Score > 27 indicates homology |
U | K.LNPAGAPAVEPK.S | |
| 1604 |
397.5410 | 1189.6012 | 1189.5979 | 2.76 | 1 | 10 | 1.5 | 5Score > 42 indicates identity Score > 24 indicates homology |
U | K.QFELKPDDAK.V | |
| 1731 |
1 |
619.9155 | 1237.8164 | 1237.8010 | 12.5 | 1 | 46 | 0.00012 | 1Score > 19 indicates identity |
U | R.VVLGLIVAEVVK.Q |
| 2564 |
817.3984 | 1632.7822 | 1632.7744 | 4.83 | 0 | 116 | 6.2e-011 | 1Score > 41 indicates identity Score > 27 indicates homology |
U | R.AAQNDDQVNIDFVGK.V |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| TIG_PSEE4 |
65 | 48359 | 26.1 | ||
| Trigger factor OS=Pseudomonas entomophila (strain L48) GN=tig PE=3 SV=1 | |||||
| 2 samesets of TIG_PSEE4 | |||||
| TIG_PSEMY |
65 | 48300 | |||
| Trigger factor OS=Pseudomonas mendocina (strain ymp) GN=tig PE=3 SV=1 | |||||
| TIG_PSEPW |
65 | 48456 | |||
| Trigger factor OS=Pseudomonas putida (strain W619) GN=tig PE=3 SV=1 | |||||
| TIG_PSEA7 |
46 | 48518 | 26.1 | ||
| Trigger factor OS=Pseudomonas aeruginosa (strain PA7) GN=tig PE=3 SV=1 | |||||
| 7 samesets of TIG_PSEA7 | |||||
| TIG_PSEAB |
46 | 48552 | |||
| Trigger factor OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tig PE=3 SV=1 | |||||
| TIG_PSEAE |
46 | 48552 | |||
| Trigger factor OS=Pseudomonas aeruginosa GN=tig PE=3 SV=1 | |||||
| TIG_PSEA8 |
46 | 48552 | |||
| Trigger factor OS=Pseudomonas aeruginosa (strain LESB58) GN=tig PE=3 SV=1 | |||||
| TIG_PSEU5 |
46 | 48281 | |||
| Trigger factor OS=Pseudomonas stutzeri (strain A1501) GN=tig PE=3 SV=1 | |||||
| TIG_PSEFS |
46 | 48316 | |||
| Trigger factor OS=Pseudomonas fluorescens (strain SBW25) GN=tig PE=3 SV=1 | |||||
| TIG_PSEPF |
46 | 48455 | |||
| Trigger factor OS=Pseudomonas fluorescens (strain Pf0-1) GN=tig PE=3 SV=1 | |||||
| TIG_PSEF5 |
46 | 48539 | |||
| Trigger factor OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tig PE=3 SV=1 | |||||
| TIG_PSE14 |
42 | 48654 | 26.1 | ||
| Trigger factor OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tig PE=3 SV=1 | |||||
| 2 samesets of TIG_PSE14 | |||||
| TIG_PSESM |
42 | 48616 | |||
| Trigger factor OS=Pseudomonas syringae pv. tomato GN=tig PE=3 SV=1 | |||||
| TIG_PSEU2 |
42 | 48644 | |||
| Trigger factor OS=Pseudomonas syringae pv. syringae (strain B728a) GN=tig PE=3 SV=1 | |||||
27| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | HTPG_PSEPK | 149 | Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1 |
28| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ILVC_PSEPG | 145 | Ketol-acid reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=ilvC PE=3 SV=1 |
29| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS2_PSEP1 | 145 | 30S ribosomal protein S2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsB PE=3 SV=1 |
30| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACP_PSEPK | 139 | Acyl carrier protein OS=Pseudomonas putida (strain KT2440) GN=acpP PE=3 SV=1 |
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