MASCOT Search Results

Search metadata
User : Jennifer
E-mail : [email protected]
Search title : Rita3 sp
MS data file : PRT1270_T-BRSC_3_20250714120051.mgf
Database : SwissProt 57.15 (515,203 sequences; 181,334,896 residues)
Timestamp : 12 Aug 2025 at 23:41:29 GMT
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Search parameters
Type of search : MS/MS Ion Search
Enzyme : GluC_Trypsin
Fixed modifications : Carbamidomethyl (C)
Variable modifications : Deamidated (NQ), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 20 ppm
Fragment mass tolerance : ± 0.1 Da
Max missed cleavages : 1
Instrument type : ESI-FTICR
Number of queries : 5,012

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

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Protein families 61–70 (out of 250)

Page: Previous 1 …2 3 4 5 6 7 8 9 10 11 12 … 25 Next 

+61

Accession Score Description
1 ODP1_PSEAE 97 Pyruvate dehydrogenase E1 component OS=Pseudomonas aeruginosa GN=aceE PE=3 SV=2

+62

Accession Score Description
1 RL10_PSEPG 97 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1

+63

Accession Score Description
1 GLPK_PSEPG 97 Glycerol kinase OS=Pseudomonas putida (strain GB-1) GN=glpK PE=3 SV=1

+64

Accession Score Description
1 KATG_PSEPK 97 Catalase-peroxidase OS=Pseudomonas putida (strain KT2440) GN=katG PE=3 SV=1

+65

Accession Score Description
1 SYD_PSEPG 96 Aspartyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=aspS PE=3 SV=1

+66

Accession Score Description
Family member distances as a dendrogram 1 G3P1_BACCE 95 Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3
2 G3P2_ANASP 43 Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1

+67

Accession Score Description
1 ASSY_PSEPG 94 Argininosuccinate synthase OS=Pseudomonas putida (strain GB-1) GN=argG PE=3 SV=1

+68

Accession Score Description
1 RL7_PSEP1 91 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplL PE=3 SV=1

-69

Accession Score Description
1 SYT_PSEPG 90 Threonyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=thrS PE=3 SV=1
Score Mass Matches Sequences emPAI
69.1 SYT_PSEPG 90 73137 6 (2) 5 (2) 0.06
Threonyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=thrS PE=3 SV=1
3 samesets of SYT_PSEPG
SYT_PSEPK 90 73165 6 (2) 5 (2) 0.06
Threonyl-tRNA synthetase OS=Pseudomonas putida (strain KT2440) GN=thrS PE=3 SV=1
SYT_PSEP1 90 73196 5 (2) 4 (2) 0.06
Threonyl-tRNA synthetase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=thrS PE=3 SV=1
SYT_PSEE4 90 73226 5 (2) 4 (2) 0.06
Threonyl-tRNA synthetase OS=Pseudomonas entomophila (strain L48) GN=thrS PE=3 SV=1

+6 peptide matches (6 non-duplicate, 0 duplicate)

1 subset or intersection (15 subset proteins in total)

Score Mass Subset of
SYT_AZOVD 50 73636 69.1
Threonyl-tRNA synthetase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=thrS PE=3 SV=1
14 samesets of SYT_AZOVD
SYT_PSEPW 50 73177
Threonyl-tRNA synthetase OS=Pseudomonas putida (strain W619) GN=thrS PE=3 SV=1
SYT_PSEAB 50 73547
Threonyl-tRNA synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=thrS PE=3 SV=1
SYT_PSEAE 50 73547
Threonyl-tRNA synthetase OS=Pseudomonas aeruginosa GN=thrS PE=3 SV=1
SYT_PSEA7 50 73545
Threonyl-tRNA synthetase OS=Pseudomonas aeruginosa (strain PA7) GN=thrS PE=3 SV=1
SYT_PSEA8 50 73547
Threonyl-tRNA synthetase OS=Pseudomonas aeruginosa (strain LESB58) GN=thrS PE=3 SV=1
SYT_PSEFS 50 72970
Threonyl-tRNA synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=thrS PE=3 SV=1
SYT_PSEMY 50 73565
Threonyl-tRNA synthetase OS=Pseudomonas mendocina (strain ymp) GN=thrS PE=3 SV=1
SYT_PSESM 50 72965
Threonyl-tRNA synthetase OS=Pseudomonas syringae pv. tomato GN=thrS PE=3 SV=1
SYT_PSEU2 50 73080
Threonyl-tRNA synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=thrS PE=3 SV=1
SYT_PSE14 50 73172
Threonyl-tRNA synthetase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=thrS PE=3 SV=1
SYT_STRMK 50 72265
Threonyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=thrS PE=3 SV=1
SYT_PSESY 50 25544
Threonyl-tRNA synthetase (Fragment) OS=Pseudomonas syringae pv. syringae GN=thrS PE=3 SV=1
SYT_THISH 50 73441
Threonyl-tRNA synthetase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=thrS PE=3 SV=1
SYT_STRM5 50 72076
Threonyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=thrS PE=3 SV=1

+70

Accession Score Description
1 OADC_PSEPG 89 Oxaloacetate decarboxylase OS=Pseudomonas putida (strain GB-1) GN=PputGB1_4424 PE=3 SV=1
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