MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita3 sp |
| MS data file | : | PRT1270_T-BRSC_3_20250714120051.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 5,012 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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61| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP1_PSEAE | 97 | Pyruvate dehydrogenase E1 component OS=Pseudomonas aeruginosa GN=aceE PE=3 SV=2 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 61.1 | ODP1_PSEAE |
97 | 99843 | 9 (4) | 8 (3) | 0.09 | |
| Pyruvate dehydrogenase E1 component OS=Pseudomonas aeruginosa GN=aceE PE=3 SV=2 | |||||||
9 peptide matches (9 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 309 |
326.1775 | 650.3404 | 650.3387 | 2.62 | 1 | 19 | 0.75 | 1Score > 44 indicates identity Score > 30 indicates homology |
K.YLAER.R | ||
| 312 |
328.6912 | 655.3678 | 655.3653 | 3.85 | 0 | 15 | 1.3 | 9Score > 37 indicates identity Score > 29 indicates homology |
R.LDGPVR.G | ||
| 379 |
345.2034 | 688.3922 | 688.3908 | 2.09 | 0 | 19 | 1.4 | 2Score > 41 indicates identity Score > 33 indicates homology |
U | R.GFIPAGK.Q | |
| 489 |
372.7069 | 743.3992 | 743.3966 | 3.53 | 0 | 17 | 1.2 | 2Score > 41 indicates identity Score > 30 indicates homology |
U | R.QWVPSK.E | |
| 523 |
380.2048 | 758.3950 | 758.3923 | 3.68 | 1 | 30 | 0.3 | 1Score > 44 indicates identity Score > 37 indicates homology |
U | R.DGLAVER.W | |
| 936 |
466.2657 | 930.5168 | 930.5134 | 3.66 | 1 | 52 | 0.0051 | 1Score > 42 indicates identity |
U | K.KVDVDSLR.A | |
| 1368 |
379.8731 | 1136.5975 | 1136.5938 | 3.22 | 1 | 42 | 0.0027 | 1Score > 40 indicates identity Score > 29 indicates homology |
U | R.NTIPVTHEAR.M | |
| 1369 |
569.3066 | 1136.5986 | 1136.5938 | 4.26 | 1 | 45 | 0.0036 | 1Score > 40 indicates identity Score > 33 indicates homology |
U | R.NTIPVTHEAR.M | |
| 1592 |
616.3093 | 1230.6040 | 1230.5993 | 3.87 | 0 | 61 | 8.8e-005 | 1Score > 41 indicates identity Score > 33 indicates homology |
U | R.IGDLAWAAGDSR.A |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| SPRT_VIBSL |
52 | 19585 | 61.1 | ||
| Protein sprT OS=Vibrio splendidus (strain LGP32) GN=sprT PE=3 SV=1 | |||||
62| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL10_PSEPG | 97 | 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1 |
63| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | GLPK_PSEPG | 97 | Glycerol kinase OS=Pseudomonas putida (strain GB-1) GN=glpK PE=3 SV=1 |
64| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | KATG_PSEPK | 97 | Catalase-peroxidase OS=Pseudomonas putida (strain KT2440) GN=katG PE=3 SV=1 |
65| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SYD_PSEPG | 96 | Aspartyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=aspS PE=3 SV=1 |
66| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | G3P1_BACCE | 95 | Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3 | |
| 2 | G3P2_ANASP | 43 | Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1 | |
67| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ASSY_PSEPG | 94 | Argininosuccinate synthase OS=Pseudomonas putida (strain GB-1) GN=argG PE=3 SV=1 |
68| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL7_PSEP1 | 91 | 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplL PE=3 SV=1 |
69| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SYT_PSEPG | 90 | Threonyl-tRNA synthetase OS=Pseudomonas putida (strain GB-1) GN=thrS PE=3 SV=1 |
70| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OADC_PSEPG | 89 | Oxaloacetate decarboxylase OS=Pseudomonas putida (strain GB-1) GN=PputGB1_4424 PE=3 SV=1 |
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