MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita3 sp |
| MS data file | : | PRT1270_T-BRSC_3_20250714120051.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 5,012 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
1| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFTU2_PSEPK | 1177 | Elongation factor Tu-B OS=Pseudomonas putida (strain KT2440) GN=tufB PE=3 SV=1 | |
| 5 | EFTU_CARRP | 73 | Elongation factor Tu OS=Carsonella ruddii (strain PV) GN=tuf PE=3 SV=1 | |
| 2 | EFTU1_PSEPK | 1045 | Elongation factor Tu-A OS=Pseudomonas putida (strain KT2440) GN=tufA PE=3 SV=1 | |
| 3 | EFTU_BACAA | 271 | Elongation factor Tu OS=Bacillus anthracis (strain A0248) GN=tuf PE=3 SV=1 | |
| 4 | EFTU_ANATD | 83 | Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1 | |
2| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPB_PSEPG | 525 | ATP synthase subunit beta OS=Pseudomonas putida (strain GB-1) GN=atpD PE=3 SV=1 | |
| 5 | ATPG_RHOP5 | 40 | description | |
| 3 | ATPB_LEGPA | 167 | ATP synthase subunit beta OS=Legionella pneumophila (strain Paris) GN=atpD PE=3 SV=1 | |
| 2 | CH60_PSEPK | 473 | 60 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groL PE=3 SV=1 | |
| 6 | CH602_PROMS | 39 | 60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1 | |
| 4 | CH602_SINMW | 59 | 60 kDa chaperonin 2 OS=Sinorhizobium medicae (strain WSM419) GN=groL2 PE=3 SV=1 | |
3| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPA_PSEPG | 522 | ATP synthase subunit alpha OS=Pseudomonas putida (strain GB-1) GN=atpA PE=3 SV=1 | |
| 2 | ATPA_RICAH | 112 | ATP synthase subunit alpha OS=Rickettsia akari (strain Hartford) GN=atpA PE=3 SV=1 | |
4| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARCA_PSEPK | 463 | Arginine deiminase OS=Pseudomonas putida (strain KT2440) GN=arcA PE=3 SV=1 |
5| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OTCC_PSEPK | 391 | Ornithine carbamoyltransferase, catabolic OS=Pseudomonas putida (strain KT2440) GN=arcB PE=3 SV=3 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 5.1 | OTCC_PSEPK |
391 | 38115 | 34 (23) | 15 (11) | 1.71 | |
| Ornithine carbamoyltransferase, catabolic OS=Pseudomonas putida (strain KT2440) GN=arcB PE=3 SV=3 | |||||||
34 peptide matches (24 non-duplicate, 10 duplicate)| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| OTCC_PSEAE |
177 | 38255 | 5.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Pseudomonas aeruginosa GN=arcB PE=1 SV=3 | |||||
| OTCC_PSEME |
117 | 38189 | 5.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Pseudomonas mendocina GN=arcB PE=3 SV=3 | |||||
| OTCC_BURMA |
66 | 38278 | 5.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Burkholderia mallei GN=arcB PE=3 SV=1 | |||||
| 3 samesets of OTCC_BURMA | |||||
| OTCC_BURPS |
66 | 38278 | |||
| Ornithine carbamoyltransferase, catabolic OS=Burkholderia pseudomallei GN=arcB PE=3 SV=1 | |||||
| OTCC_HAEGA |
66 | 37705 | |||
| Ornithine carbamoyltransferase, catabolic OS=Haemophilus gallinarum GN=arcB PE=3 SV=1 | |||||
| OTC_HAEDU |
66 | 37722 | |||
| Ornithine carbamoyltransferase OS=Haemophilus ducreyi GN=argF PE=3 SV=1 | |||||
| OTCC_HAEIN |
61 | 37908 | 5.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Haemophilus influenzae GN=arcB PE=3 SV=1 | |||||
| 2 samesets of OTCC_HAEIN | |||||
| OTC_HAEIG |
61 | 37881 | |||
| Ornithine carbamoyltransferase OS=Haemophilus influenzae (strain PittGG) GN=arcB PE=3 SV=1 | |||||
| OTC_MANSM |
61 | 37793 | |||
| Ornithine carbamoyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=argF PE=3 SV=1 | |||||
| OTCC_CHRVO |
56 | 38025 | 5.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Chromobacterium violaceum GN=arcB PE=3 SV=1 | |||||
| AMN1_PICAN |
47 | 0 | 5.1 | ||
| description | |||||
| 19 samesets of AMN1_PICAN | |||||
| DNAE2_RALSO |
47 | 120147 | |||
| Error-prone DNA polymerase OS=Ralstonia solanacearum GN=dnaE2 PE=3 SV=1 | |||||
| OTC_CLOAB |
47 | 0 | |||
| description | |||||
| SYA_IGNH4 |
47 | 0 | |||
| description | |||||
| CIPKB_ORYSJ |
47 | 0 | |||
| description | |||||
| FAS_RAT |
47 | 0 | |||
| description | |||||
| DOP1_EMENI |
47 | 0 | |||
| description | |||||
| IML1_NEUCR |
47 | 0 | |||
| description | |||||
| CHDM_DROME |
47 | 0 | |||
| description | |||||
| GB_MCMVS |
47 | 0 | |||
| description | |||||
| MURI_LACAC |
47 | 0 | |||
| description | |||||
| THEG_HUMAN |
47 | 0 | |||
| description | |||||
| BOP1_DICDI |
47 | 0 | |||
| description | |||||
| DNAE2_RALPJ |
47 | 0 | |||
| description | |||||
| IMPA3_MOUSE |
47 | 0 | |||
| description | |||||
| RL3_SPHWW |
47 | 0 | |||
| description | |||||
| YHC3_SCHPO |
47 | 0 | |||
| description | |||||
| RS4_DROME |
47 | 0 | |||
| description | |||||
| RL32_CARHZ |
47 | 0 | |||
| description | |||||
| UNC53_CAEEL |
47 | 0 | |||
| description | |||||
| OTCC_RHIET |
40 | 38135 | 5.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Rhizobium etli GN=arcB PE=3 SV=1 | |||||
| 12 samesets of OTCC_RHIET | |||||
| OTC_ACTPJ |
40 | 37600 | |||
| Ornithine carbamoyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=arcB PE=3 SV=1 | |||||
| OTC_NEIGO |
40 | 36823 | |||
| Ornithine carbamoyltransferase OS=Neisseria gonorrhoeae GN=argF PE=3 SV=1 | |||||
| OTC_NEILA |
40 | 28761 | |||
| Ornithine carbamoyltransferase (Fragment) OS=Neisseria lactamica GN=argF PE=3 SV=1 | |||||
| OTC_NEIMA |
40 | 36795 | |||
| Ornithine carbamoyltransferase OS=Neisseria meningitidis serogroup A GN=argF PE=3 SV=1 | |||||
| OTC_NEIMB |
40 | 36807 | |||
| Ornithine carbamoyltransferase OS=Neisseria meningitidis serogroup B GN=argF PE=3 SV=1 | |||||
| OTC_NEIME |
40 | 28974 | |||
| Ornithine carbamoyltransferase (Fragment) OS=Neisseria meningitidis GN=argF PE=3 SV=2 | |||||
| OTC_NEIPE |
40 | 25521 | |||
| Ornithine carbamoyltransferase (Fragment) OS=Neisseria perflava GN=argF PE=3 SV=1 | |||||
| OTC_NEIPO |
40 | 28876 | |||
| Ornithine carbamoyltransferase (Fragment) OS=Neisseria polysaccharea GN=argF PE=3 SV=1 | |||||
| OTC_NEIG1 |
40 | 36768 | |||
| Ornithine carbamoyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=argF PE=3 SV=1 | |||||
| OTC_ACTP2 |
40 | 37600 | |||
| Ornithine carbamoyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=argF PE=3 SV=1 | |||||
| OTC_ACTP7 |
40 | 37600 | |||
| Ornithine carbamoyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=arcB PE=3 SV=1 | |||||
| OTCC_RHIME |
40 | 37978 | |||
| Ornithine carbamoyltransferase, catabolic OS=Rhizobium meliloti GN=arcB PE=3 SV=1 | |||||
6| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOC_PSEPG | 350 | DNA-directed RNA polymerase subunit beta' OS=Pseudomonas putida (strain GB-1) GN=rpoC PE=3 SV=1 | |
| 2 | RPOC_PSEA7 | 244 | DNA-directed RNA polymerase subunit beta' OS=Pseudomonas aeruginosa (strain PA7) GN=rpoC PE=3 SV=1 | |
| 3 | FTSZ_PSEPK | 95 | Cell division protein ftsZ OS=Pseudomonas putida (strain KT2440) GN=ftsZ PE=3 SV=3 | |
7| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DLDH2_PSEPU | 349 | Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4 |
8| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ADHP_ECOLI | 327 | Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1 |
9| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACON2_PSEAE | 321 | Aconitate hydratase 2 OS=Pseudomonas aeruginosa GN=acnB PE=3 SV=1 |
10| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCC_PSEPK | 313 | Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1 |
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