MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita3 sp |
| MS data file | : | PRT1270_T-BRSC_3_20250714120051.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 5,012 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PURA_PSEPG | 138 | Adenylosuccinate synthetase OS=Pseudomonas putida (strain GB-1) GN=purA PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | NUOG_PSEPK | 138 | NADH-quinone oxidoreductase subunit G OS=Pseudomonas putida (strain KT2440) GN=nuoG PE=3 SV=1 |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL18_PSEP1 | 136 | 50S ribosomal protein L18 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplR PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 33.1 | RL18_PSEP1 |
136 | 12677 | 3 (3) | 3 (3) | 0.68 | |
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplR PE=3 SV=1 | |||||||
| 3 samesets of RL18_PSEP1 | |||||||
| RL18_PSEPG |
136 | 12677 | 3 (3) | 3 (3) | 0.68 | ||
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain GB-1) GN=rplR PE=3 SV=1 | |||||||
| RL18_PSEPK |
136 | 12677 | 3 (3) | 3 (3) | 0.68 | ||
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain KT2440) GN=rplR PE=3 SV=1 | |||||||
| RL18_PSEPW |
136 | 12665 | 3 (3) | 3 (3) | 0.68 | ||
| 50S ribosomal protein L18 OS=Pseudomonas putida (strain W619) GN=rplR PE=3 SV=1 | |||||||
3 peptide matches (3 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1328 |
560.7927 | 1119.5708 | 1119.5673 | 3.19 | 0 | 73 | 3.2e-005 | 1Score > 42 indicates identity Score > 40 indicates homology |
U | K.AAGVSQVAFDR.S | |
| 1361 |
567.2830 | 1132.5514 | 1132.5360 | 13.6 | 0 | 41 | 0.003 | 1Score > 42 indicates identity Score > 28 indicates homology |
U | R.DGATGNIDAATK.V | |
| 1911 |
463.5983 | 1387.7731 | 1387.7671 | 4.32 | 1 | 92 | 1.6e-007 | 1Score > 38 indicates identity Score > 36 indicates homology |
U | K.VLASASTLDKDLR.D |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL18_PSEA7 |
92 | 12711 | 33.1 | ||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa (strain PA7) GN=rplR PE=3 SV=1 | |||||
| 4 samesets of RL18_PSEA7 | |||||
| RL18_PSEA8 |
92 | 12711 | |||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEAB |
92 | 12711 | |||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEAE |
92 | 12711 | |||
| 50S ribosomal protein L18 OS=Pseudomonas aeruginosa GN=rplR PE=3 SV=1 | |||||
| RL18_TERTT |
92 | 12760 | |||
| 50S ribosomal protein L18 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=rplR PE=3 SV=1 | |||||
| RL18_PSE14 |
79 | 12653 | 33.1 | ||
| 50S ribosomal protein L18 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplR PE=3 SV=1 | |||||
| 6 samesets of RL18_PSE14 | |||||
| RL18_PSEE4 |
79 | 12651 | |||
| 50S ribosomal protein L18 OS=Pseudomonas entomophila (strain L48) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEF5 |
79 | 12692 | |||
| 50S ribosomal protein L18 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEFS |
79 | 12708 | |||
| 50S ribosomal protein L18 OS=Pseudomonas fluorescens (strain SBW25) GN=rplR PE=3 SV=1 | |||||
| RL18_PSEPF |
79 | 12692 | |||
| 50S ribosomal protein L18 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplR PE=3 SV=1 | |||||
| RL18_PSESM |
79 | 12653 | |||
| 50S ribosomal protein L18 OS=Pseudomonas syringae pv. tomato GN=rplR PE=3 SV=1 | |||||
| RL18_PSEU2 |
79 | 12653 | |||
| 50S ribosomal protein L18 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplR PE=3 SV=1 | |||||
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCD_PSEAE | 132 | Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ENO_PSEPK | 132 | Enolase OS=Pseudomonas putida (strain KT2440) GN=eno PE=3 SV=1 |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP2_PSEAE | 130 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Pseudomonas aeruginosa GN=aceF PE=3 SV=2 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFTS_PSEPK | 125 | Elongation factor Ts OS=Pseudomonas putida (strain KT2440) GN=tsf PE=3 SV=1 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS5_PSEE4 | 124 | 30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1 |
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PGK_PSEPG | 122 | Phosphoglycerate kinase OS=Pseudomonas putida (strain GB-1) GN=pgk PE=3 SV=1 |
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | HYDA_PSEPU | 120 | D-hydantoinase/dihydropyrimidinase OS=Pseudomonas putida GN=dht PE=1 SV=2 | |
| 2 | HYDA_PSEAE | 115 | D-hydantoinase/dihydropyrimidinase OS=Pseudomonas aeruginosa GN=dht PE=3 SV=1 | |
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