MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita3 sp |
| MS data file | : | PRT1270_T-BRSC_3_20250714120051.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 5,012 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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11| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DBHB_PSEAE | 311 | DNA-binding protein HU-beta OS=Pseudomonas aeruginosa GN=hupB PE=1 SV=3 |
12| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOB_PSEPG | 306 | DNA-directed RNA polymerase subunit beta OS=Pseudomonas putida (strain GB-1) GN=rpoB PE=3 SV=1 |
13| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFG1_PSEPK | 280 | Elongation factor G 1 OS=Pseudomonas putida (strain KT2440) GN=fusA PE=3 SV=1 |
14| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DNAK_PSEPK | 280 | Chaperone protein dnaK OS=Pseudomonas putida (strain KT2440) GN=dnaK PE=2 SV=1 |
15| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RISB_PSEPG | 245 | 6,7-dimethyl-8-ribityllumazine synthase OS=Pseudomonas putida (strain GB-1) GN=ribH PE=3 SV=1 |
16| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SAHH_PSEP1 | 221 | Adenosylhomocysteinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ahcY PE=3 SV=1 |
17| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SECB_PSEPG | 208 | Protein-export protein secB OS=Pseudomonas putida (strain GB-1) GN=secB PE=3 SV=1 |
18| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DHSA_ECOLI | 192 | Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli (strain K12) GN=sdhA PE=1 SV=1 |
19| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CLPB_PSEPK | 191 | Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1 |
20| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PNP_PSEPK | 188 | Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain KT2440) GN=pnp PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 20.1 | PNP_PSEPK |
188 | 75192 | 11 (7) | 9 (7) | 0.23 | |
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain KT2440) GN=pnp PE=3 SV=1 | |||||||
| 2 samesets of PNP_PSEPK | |||||||
| PNP_PSEPU |
188 | 75166 | 11 (7) | 9 (7) | 0.23 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida GN=pnp PE=3 SV=1 | |||||||
| PNP_PSEP1 |
188 | 75139 | 11 (7) | 9 (7) | 0.23 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pnp PE=3 SV=1 | |||||||
11 peptide matches (11 non-duplicate, 0 duplicate)| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| PNP_PSEE4 |
171 | 75140 | 20.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas entomophila (strain L48) GN=pnp PE=3 SV=1 | |||||
| 1 sameset of PNP_PSEE4 | |||||
| PNP_PSEPG |
171 | 75207 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain GB-1) GN=pnp PE=3 SV=1 | |||||
| PNP_AZOVD |
158 | 75912 | 20.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pnp PE=3 SV=1 | |||||
| PNP_PSE14 |
109 | 75121 | 20.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pnp PE=3 SV=1 | |||||
| 6 samesets of PNP_PSE14 | |||||
| PNP_PSEFS |
109 | 75117 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEPF |
109 | 75026 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEPW |
109 | 75250 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas putida (strain W619) GN=pnp PE=3 SV=1 | |||||
| PNP_PSESM |
109 | 75108 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syringae pv. tomato GN=pnp PE=3 SV=1 | |||||
| PNP_PSEU2 |
109 | 75123 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEF5 |
109 | 75343 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEMY |
96 | 75677 | 20.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas mendocina (strain ymp) GN=pnp PE=3 SV=2 | |||||
| 1 sameset of PNP_PSEMY | |||||
| PNP_PSEU5 |
96 | 75420 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEA7 |
79 | 75691 | 20.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=pnp PE=3 SV=1 | |||||
| 3 samesets of PNP_PSEA7 | |||||
| PNP_PSEAB |
79 | 75634 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEAE |
79 | 75634 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa GN=pnp PE=3 SV=1 | |||||
| PNP_PSEA8 |
79 | 75634 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=pnp PE=3 SV=1 | |||||
| PNP_POLNS |
65 | 77289 | 20.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Polynucleobacter necessarius (strain STIR1) GN=pnp PE=3 SV=1 | |||||
| 1 sameset of PNP_POLNS | |||||
| PNP_POLSQ |
65 | 77293 | |||
| Polyribonucleotide nucleotidyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=pnp PE=3 SV=1 | |||||
| PNP_MARAV |
45 | 78217 | 20.1 | ||
| Polyribonucleotide nucleotidyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pnp PE=3 SV=1 | |||||
| 13 samesets of PNP_MARAV | |||||
| PNP_SHEAM |
45 | 75438 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEFN |
45 | 75279 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEON |
45 | 75605 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella oneidensis GN=pnp PE=3 SV=2 | |||||
| PNP_SHEPC |
45 | 75520 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESA |
45 | 75432 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain ANA-3) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESM |
45 | 75355 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain MR-4) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESR |
45 | 75341 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain MR-7) GN=pnp PE=3 SV=1 | |||||
| PNP_SHESW |
45 | 75520 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella sp. (strain W3-18-1) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEB2 |
45 | 75322 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS223) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEB5 |
45 | 75393 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pnp PE=3 SV=2 | |||||
| PNP_SHEB8 |
45 | 75363 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS185) GN=pnp PE=3 SV=1 | |||||
| PNP_SHEB9 |
45 | 75393 | |||
| Polyribonucleotide nucleotidyltransferase OS=Shewanella baltica (strain OS195) GN=pnp PE=3 SV=1 | |||||
| PNP_PSEHT |
45 | 75667 | |||
| Polyribonucleotide nucleotidyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=pnp PE=3 SV=1 | |||||
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