MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita3 sp |
| MS data file | : | PRT1270_T-BRSC_3_20250714120051.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:41:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 5,012 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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1| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFTU2_PSEPK | 1177 | Elongation factor Tu-B OS=Pseudomonas putida (strain KT2440) GN=tufB PE=3 SV=1 | |
| 5 | EFTU_CARRP | 73 | Elongation factor Tu OS=Carsonella ruddii (strain PV) GN=tuf PE=3 SV=1 | |
| 2 | EFTU1_PSEPK | 1045 | Elongation factor Tu-A OS=Pseudomonas putida (strain KT2440) GN=tufA PE=3 SV=1 | |
| 3 | EFTU_BACAA | 271 | Elongation factor Tu OS=Bacillus anthracis (strain A0248) GN=tuf PE=3 SV=1 | |
| 4 | EFTU_ANATD | 83 | Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1 | |
2| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPB_PSEPG | 525 | ATP synthase subunit beta OS=Pseudomonas putida (strain GB-1) GN=atpD PE=3 SV=1 | |
| 5 | ATPG_RHOP5 | 40 | description | |
| 3 | ATPB_LEGPA | 167 | ATP synthase subunit beta OS=Legionella pneumophila (strain Paris) GN=atpD PE=3 SV=1 | |
| 2 | CH60_PSEPK | 473 | 60 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groL PE=3 SV=1 | |
| 6 | CH602_PROMS | 39 | 60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1 | |
| 4 | CH602_SINMW | 59 | 60 kDa chaperonin 2 OS=Sinorhizobium medicae (strain WSM419) GN=groL2 PE=3 SV=1 | |
3| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPA_PSEPG | 522 | ATP synthase subunit alpha OS=Pseudomonas putida (strain GB-1) GN=atpA PE=3 SV=1 | |
| 2 | ATPA_RICAH | 112 | ATP synthase subunit alpha OS=Rickettsia akari (strain Hartford) GN=atpA PE=3 SV=1 | |
4| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARCA_PSEPK | 463 | Arginine deiminase OS=Pseudomonas putida (strain KT2440) GN=arcA PE=3 SV=1 |
5| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OTCC_PSEPK | 391 | Ornithine carbamoyltransferase, catabolic OS=Pseudomonas putida (strain KT2440) GN=arcB PE=3 SV=3 |
6| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOC_PSEPG | 350 | DNA-directed RNA polymerase subunit beta' OS=Pseudomonas putida (strain GB-1) GN=rpoC PE=3 SV=1 | |
| 2 | RPOC_PSEA7 | 244 | DNA-directed RNA polymerase subunit beta' OS=Pseudomonas aeruginosa (strain PA7) GN=rpoC PE=3 SV=1 | |
| 3 | FTSZ_PSEPK | 95 | Cell division protein ftsZ OS=Pseudomonas putida (strain KT2440) GN=ftsZ PE=3 SV=3 | |
7| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DLDH2_PSEPU | 349 | Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4 |
8| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ADHP_ECOLI | 327 | Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1 |
9| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACON2_PSEAE | 321 | Aconitate hydratase 2 OS=Pseudomonas aeruginosa GN=acnB PE=3 SV=1 |
10| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCC_PSEPK | 313 | Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 10.1 | SUCC_PSEPK |
313 | 41499 | 20 (15) | 13 (10) | 0.91 | |
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1 | |||||||
| 1 sameset of SUCC_PSEPK | |||||||
| SUCC_PSEP1 |
313 | 41499 | 20 (15) | 13 (10) | 0.91 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=sucC PE=3 SV=1 | |||||||
20 peptide matches (16 non-duplicate, 4 duplicate)| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| SUCC_PSEE4 |
313 | 41472 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas entomophila (strain L48) GN=sucC PE=3 SV=1 | |||||
| 1 sameset of SUCC_PSEE4 | |||||
| SUCC_PSEPW |
313 | 41472 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain W619) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSEPG |
220 | 41413 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain GB-1) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSEPF |
215 | 41527 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain Pf0-1) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSE14 |
208 | 41494 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sucC PE=3 SV=1 | |||||
| 4 samesets of SUCC_PSE14 | |||||
| SUCC_PSEFS |
208 | 41547 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain SBW25) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSEF5 |
208 | 41599 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSESM |
208 | 41472 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. tomato GN=sucC PE=3 SV=1 | |||||
| SUCC_PSEU2 |
208 | 41442 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSEA7 |
147 | 41772 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain PA7) GN=sucC PE=3 SV=1 | |||||
| 3 samesets of SUCC_PSEA7 | |||||
| SUCC_PSEAB |
147 | 41830 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSEAE |
147 | 41802 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa GN=sucC PE=3 SV=2 | |||||
| SUCC_PSEA8 |
147 | 41802 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain LESB58) GN=sucC PE=3 SV=1 | |||||
| SUCC_VIBC3 |
71 | 41658 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sucC PE=3 SV=1 | |||||
| 2 samesets of SUCC_VIBC3 | |||||
| SUCC_VIBCH |
71 | 41658 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae GN=sucC PE=3 SV=1 | |||||
| SUCC_VIBCM |
71 | 41658 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae serotype O1 (strain M66-2) GN=sucC PE=3 SV=1 | |||||
| SUCC_MARAV |
55 | 41495 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=sucC PE=3 SV=1 | |||||
| 2 samesets of SUCC_MARAV | |||||
| SUCC_PSEU5 |
55 | 41761 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas stutzeri (strain A1501) GN=sucC PE=3 SV=1 | |||||
| SUCC_SACD2 |
55 | 41524 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSEMY |
51 | 41759 | 10.1 | ||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas mendocina (strain ymp) GN=sucC PE=3 SV=1 | |||||
| 1 sameset of SUCC_PSEMY | |||||
| SUCC_TERTT |
51 | 41703 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=sucC PE=3 SV=1 | |||||
| PARB2_DEIRA |
31 | 32872 | 10.1 | ||
| Probable chromosome 2-partitioning protein parB OS=Deinococcus radiodurans GN=parB2 PE=3 SV=1 | |||||
| 46 samesets of PARB2_DEIRA |
|||||
| SUCC_AERHH |
31 | 41832 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sucC PE=3 SV=1 | |||||
| SUCC_AZOVD |
31 | 42114 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=sucC PE=3 SV=1 | |||||
| SUCC_AERS4 |
31 | 41780 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aeromonas salmonicida (strain A449) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEDO |
31 | 41531 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEFN |
31 | 41493 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella frigidimarina (strain NCIMB 400) GN=sucC PE=3 SV=1 | |||||
| SUCB_ARATH |
31 | 45602 | |||
| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1 | |||||
| SUCB_ORYSJ |
31 | 45405 | |||
| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1 SV=1 | |||||
| SUCC_ALISL |
31 | 41680 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aliivibrio salmonicida (strain LFI1238) GN=sucC PE=3 SV=1 | |||||
| SUCC_ALTMD |
31 | 41704 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=sucC PE=3 SV=1 | |||||
| SUCC_HAEIE |
31 | 42471 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain PittEE) GN=sucC PE=3 SV=1 | |||||
| SUCC_HAEIG |
31 | 43060 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain PittGG) GN=sucC PE=3 SV=1 | |||||
| SUCC_HAEIN |
31 | 42480 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae GN=sucC PE=3 SV=1 | |||||
| SUCC_HALHL |
31 | 41735 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=sucC PE=3 SV=1 | |||||
| SUCC_PHOPR |
31 | 41735 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Photobacterium profundum GN=sucC PE=3 SV=1 | |||||
| SUCC_PSYCK |
31 | 41812 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Psychrobacter cryohalolentis (strain K5) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEAM |
31 | 41669 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEHH |
31 | 41624 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella halifaxensis (strain HAW-EB4) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHELP |
31 | 41623 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEON |
31 | 41677 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella oneidensis GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEPA |
31 | 41799 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEPC |
31 | 41699 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEPW |
31 | 41779 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHESA |
31 | 41656 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain ANA-3) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHESM |
31 | 41682 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain MR-4) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHESR |
31 | 41682 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain MR-7) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHESW |
31 | 41699 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain W3-18-1) GN=sucC PE=3 SV=1 | |||||
| SUCC_STRMK |
31 | 41394 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Stenotrophomonas maltophilia (strain K279a) GN=sucC PE=3 SV=1 | |||||
| SUCC_TOLAT |
31 | 41682 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=sucC PE=3 SV=1 | |||||
| SUCC_VIBFM |
31 | 41642 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio fischeri (strain MJ11) GN=sucC PE=3 SV=1 | |||||
| SUCC_XANAC |
31 | 41542 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas axonopodis pv. citri GN=sucC PE=3 SV=1 | |||||
| SUCC_XANCB |
31 | 41561 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain B100) GN=sucC PE=3 SV=1 | |||||
| SUCC_XANCP |
31 | 41575 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris GN=sucC PE=3 SV=1 | |||||
| SUCC_XANOM |
31 | 41545 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=sucC PE=3 SV=1 | |||||
| SUCC_XANOP |
31 | 41545 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=sucC PE=3 SV=1 | |||||
| SUCC_XANOR |
31 | 41545 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae GN=sucC PE=3 SV=1 | |||||
| SUCC_VIBF1 |
31 | 41642 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sucC PE=3 SV=1 | |||||
| SUCC_PSYA2 |
31 | 41775 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEB2 |
31 | 41582 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS223) GN=sucC PE=3 SV=1 | |||||
| SUCC_COLP3 |
31 | 41978 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEB5 |
31 | 41582 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sucC PE=3 SV=1 | |||||
| SUCC_STRM5 |
31 | 41394 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Stenotrophomonas maltophilia (strain R551-3) GN=sucC PE=3 SV=1 | |||||
| SUCC_XANC5 |
31 | 41570 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=sucC PE=3 SV=1 | |||||
| SUCC_HAEI8 |
31 | 42573 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain 86-028NP) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEB8 |
31 | 41582 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS185) GN=sucC PE=3 SV=1 | |||||
| SUCC_XANC8 |
31 | 41575 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sucC PE=3 SV=1 | |||||
| SUCC_SHEB9 |
31 | 41582 | |||
| Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS195) GN=sucC PE=3 SV=1 | |||||
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