MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita2 sp |
| MS data file | : | PRT1270_T-BRSC_2_20250714115216.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:39:15 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,778 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
91| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL15_PSEP1 | 53 | 50S ribosomal protein L15 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplO PE=3 SV=1 |
92| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS3_PSEE4 | 53 | 30S ribosomal protein S3 OS=Pseudomonas entomophila (strain L48) GN=rpsC PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 92.1 | RS3_PSEE4 |
53 | 25709 | 20 (3) | 9 (3) | 0.30 | |
| 30S ribosomal protein S3 OS=Pseudomonas entomophila (strain L48) GN=rpsC PE=3 SV=1 | |||||||
| 3 samesets of RS3_PSEE4 | |||||||
| RS3_PSEP1 |
53 | 25709 | 20 (3) | 9 (3) | 0.30 | ||
| 30S ribosomal protein S3 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsC PE=3 SV=1 | |||||||
| RS3_PSEPK |
53 | 25709 | 20 (3) | 9 (3) | 0.30 | ||
| 30S ribosomal protein S3 OS=Pseudomonas putida (strain KT2440) GN=rpsC PE=3 SV=2 | |||||||
| RS3_PSEU5 |
53 | 25730 | 20 (3) | 9 (3) | 0.30 | ||
| 30S ribosomal protein S3 OS=Pseudomonas stutzeri (strain A1501) GN=rpsC PE=3 SV=1 | |||||||
20 peptide matches (13 non-duplicate, 7 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
| 406 |
659.3854 | 658.3781 | 658.3762 | 2.89 | 0 | 23 | 0.34 | 1Score > 44 indicates identity Score > 31 indicates homology |
K.IQVSGR.L | ||
| 407 |
1 |
330.1965 | 658.3784 | 658.3762 | 3.38 | 0 | 32 | 0.17 | 1Score > 42 indicates identity Score > 37 indicates homology |
K.IQVSGR.L | |
| 484 |
1 |
346.7130 | 691.4114 | 691.4057 | 8.27 | 0 | 30 | 0.051 | 1Score > 37 indicates identity Score > 30 indicates homology |
U | K.VWIFK.G |
| 623 |
377.6807 | 753.3468 | 753.3446 | 3.02 | 1 | 19 | 0.76 | 1Score > 39 indicates identity Score > 31 indicates homology |
R.TEWYR.E | ||
| 705 |
1 |
393.7283 | 785.4420 | 785.4395 | 3.21 | 1 | 37 | 0.17 | 1Score > 43 indicates identity Score > 42 indicates homology |
R.LGGAEIAR.T | |
| 721 |
398.1989 | 794.3832 | 794.3810 | 2.81 | 1 | 12 | 1.2 | 2Score > 41 indicates identity Score > 25 indicates homology |
R.EYLQDK.L | ||
| 802 |
418.2628 | 834.5110 | 834.5076 | 4.17 | 0 | 24 | 0.33 | 1Score > 33 indicates identity Score > 32 indicates homology |
R.VPLHTLR.A | ||
| 1837 |
320.1833 | 1276.7041 | 1276.7000 | 3.21 | 0 | 16 | 0.46 | 1Score > 38 indicates identity Score > 25 indicates homology |
U | R.IDIHRPAQTAR.I | |
| 1838 |
1 |
426.5754 | 1276.7044 | 1276.7000 | 3.43 | 0 | 15 | 0.2 | 1Score > 38 indicates identity Score > 21 indicates homology |
U | R.IDIHRPAQTAR.I |
| 1839 |
639.3601 | 1276.7056 | 1276.7000 | 4.43 | 0 | 18 | 0.37 | 1Score > 38 indicates identity Score > 26 indicates homology |
U | R.IDIHRPAQTAR.I | |
| 2251 |
2 |
369.7336 | 1474.9053 | 1474.8984 | 4.69 | 0 | 10 | 1 | 1Score > 26 indicates identity Score > 22 indicates homology |
U | R.ITIHTARPGIVIGK.K |
| 2252 |
1 |
492.6426 | 1474.9060 | 1474.8984 | 5.15 | 0 | 23 | 0.018 | 1Score > 25 indicates identity Score > 18 indicates homology |
U | R.ITIHTARPGIVIGK.K |
| 3601 |
744.3666 | 2230.0780 | 2230.0430 | 15.7 | 1 | 46 | 0.00023 | 1Score > 39 indicates identity Score > 23 indicates homology |
U | R.ADIDYNTYEAHTTYGVIGVK.V + Deamidated (NQ) |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RR3_CHLMO |
30 | 0 | 92.1 | ||
| description | |||||
| 231 samesets of RR3_CHLMO |
|||||
| RS3_HAHCH |
30 | 25467 | 92.1 | ||
| 30S ribosomal protein S3 OS=Hahella chejuensis (strain KCTC 2396) GN=rpsC PE=3 SV=1 | |||||
| 11 samesets of RS3_HAHCH | |||||
| RS3_PSE14 |
30 | 25737 | |||
| 30S ribosomal protein S3 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsC PE=3 SV=1 | |||||
| RS3_PSEA7 |
30 | 25822 | |||
| 30S ribosomal protein S3 OS=Pseudomonas aeruginosa (strain PA7) GN=rpsC PE=3 SV=1 | |||||
| RS3_PSEAB |
30 | 25822 | |||
| 30S ribosomal protein S3 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rpsC PE=3 SV=1 | |||||
| RS3_PSEAE |
30 | 25822 | |||
| 30S ribosomal protein S3 OS=Pseudomonas aeruginosa GN=rpsC PE=3 SV=1 | |||||
| RS3_PSEF5 |
30 | 25676 | |||
| 30S ribosomal protein S3 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpsC PE=3 SV=1 | |||||
| RS3_PSEPF |
30 | 25737 | |||
| 30S ribosomal protein S3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rpsC PE=3 SV=1 | |||||
| RS3_PSESM |
30 | 25737 | |||
| 30S ribosomal protein S3 OS=Pseudomonas syringae pv. tomato GN=rpsC PE=3 SV=1 | |||||
| RS3_PSEU2 |
30 | 25737 | |||
| 30S ribosomal protein S3 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpsC PE=3 SV=1 | |||||
| RS3_PSEMY |
30 | 25525 | |||
| 30S ribosomal protein S3 OS=Pseudomonas mendocina (strain ymp) GN=rpsC PE=3 SV=1 | |||||
| RS3_MARAV |
30 | 25498 | |||
| 30S ribosomal protein S3 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rpsC PE=3 SV=1 | |||||
| RS3_NITOC |
30 | 24932 | |||
| 30S ribosomal protein S3 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rpsC PE=3 SV=1 | |||||
| RS3_CHRSD |
23 | 26097 | 92.1 | ||
| 30S ribosomal protein S3 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=rpsC PE=3 SV=1 | |||||
| 6 samesets of RS3_CHRSD | |||||
| RS3_FRATF |
23 | 24862 | |||
| 30S ribosomal protein S3 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rpsC PE=3 SV=1 | |||||
| RS3_FRATH |
23 | 24862 | |||
| 30S ribosomal protein S3 OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rpsC PE=3 SV=1 | |||||
| RS3_FRATM |
23 | 24848 | |||
| 30S ribosomal protein S3 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=rpsC PE=3 SV=1 | |||||
| RS3_FRATN |
23 | 24792 | |||
| 30S ribosomal protein S3 OS=Francisella tularensis subsp. novicida (strain U112) GN=rpsC PE=3 SV=1 | |||||
| RS3_FRATO |
23 | 24862 | |||
| 30S ribosomal protein S3 OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=rpsC PE=3 SV=1 | |||||
| RS3_FRATW |
23 | 24862 | |||
| 30S ribosomal protein S3 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rpsC PE=3 SV=1 | |||||
93| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | XIRP1_CHICK | 50 | Xin actin-binding repeat-containing protein 1 OS=Gallus gallus GN=Xirp1 PE=2 SV=3 |
94| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODP1_PSEAE | 50 | Pyruvate dehydrogenase E1 component OS=Pseudomonas aeruginosa GN=aceE PE=3 SV=2 |
95| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PURA_PSEFS | 49 | Adenylosuccinate synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=purA PE=3 SV=1 |
96| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DNAB_MYCPN | 49 | Replicative DNA helicase OS=Mycoplasma pneumoniae GN=dnaB PE=1 SV=1 |
97| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | BETI_PROMH | 48 | HTH-type transcriptional regulator betI OS=Proteus mirabilis (strain HI4320) GN=betI PE=3 SV=1 |
98| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | Y396_PSEPK | 48 | UPF0229 protein PP_0396 OS=Pseudomonas putida (strain KT2440) GN=PP_0396 PE=3 SV=1 |
99| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ISPD_ALKMQ | 48 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispD PE=3 SV=1 |
100| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ARGJ_OCEIH | 48 | Arginine biosynthesis bifunctional protein argJ OS=Oceanobacillus iheyensis GN=argJ PE=3 SV=1 |
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