MASCOT Search Results

Search metadata
User : Jennifer
E-mail : [email protected]
Search title : Rita2 sp
MS data file : PRT1270_T-BRSC_2_20250714115216.mgf
Database : SwissProt 57.15 (515,203 sequences; 181,334,896 residues)
Timestamp : 12 Aug 2025 at 23:39:15 GMT
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Search parameters
Type of search : MS/MS Ion Search
Enzyme : GluC_Trypsin
Fixed modifications : Carbamidomethyl (C)
Variable modifications : Deamidated (NQ), Oxidation (M)
Mass values : Monoisotopic
Protein mass : Unrestricted
Peptide mass tolerance : ± 20 ppm
Fragment mass tolerance : ± 0.1 Da
Max missed cleavages : 1
Instrument type : ESI-FTICR
Number of queries : 4,778

Score distribution

Peptide score distribution

Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).

Protein score distribution for the first 50 proteins

[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.

Legend
Dupes Expect Rank U 1 2 Peptide
0.037 +2 GAYSLSLR significant
9 +1 GFFLFVEGGR top ranking
6.4e-005 +1 GSSIFGLAPGK significant and top ranking
1.3e-006 +1 X SSGTSYPDVLK peptide is found in all proteins in family member 1
6.2e-007 +1 / VCNYVSWIK peptide is found in some but not all proteins in family member 2
6.4e-005 +1 U GSSIFGLAPGK unique
+2 5.7e-005 +1 LNTLETEEWFFK peptide has two duplicates
0.18 +1 LNTLETEEWFFK duplicate peptide

Right-facing triangle (+) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (-) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

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Protein families 1–10 (out of 179)

Page: 1 2 3 4 5 6 … 18 Next 

+1

Accession Score Description
Family member distances as a dendrogram 1 EFTU2_PSEPK 1121 Elongation factor Tu-B OS=Pseudomonas putida (strain KT2440) GN=tufB PE=3 SV=1
6 EFTU_CYAP7 40 Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1
5 EFTU_ANATD 50 Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1
3 EFTU_PSEFS 701 Elongation factor Tu OS=Pseudomonas fluorescens (strain SBW25) GN=tuf PE=3 SV=1
2 EFTU1_PSEPK 1002 Elongation factor Tu-A OS=Pseudomonas putida (strain KT2440) GN=tufA PE=3 SV=1
4 EFTU_CARRP 145 Elongation factor Tu OS=Carsonella ruddii (strain PV) GN=tuf PE=3 SV=1

+2

Accession Score Description
1 ATPB_PSEPG 972 ATP synthase subunit beta OS=Pseudomonas putida (strain GB-1) GN=atpD PE=3 SV=1

+3

Accession Score Description
Family member distances as a dendrogram 1 ATPA_PSEPK 749 ATP synthase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=atpA PE=3 SV=1
2 ATPA_RICAH 179 ATP synthase subunit alpha OS=Rickettsia akari (strain Hartford) GN=atpA PE=3 SV=1
3 ATPA_VEREI 174 ATP synthase subunit alpha OS=Verminephrobacter eiseniae (strain EF01-2) GN=atpA PE=3 SV=1

+4

Accession Score Description
Family member distances as a dendrogram 1 CH60_PSEPK 584 60 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groL PE=3 SV=1
3 CH602_SORC5 80 60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1
2 CH601_ECOK1 123 60 kDa chaperonin 1 OS=Escherichia coli O1:K1 / APEC GN=groL1 PE=3 SV=1

+5

Accession Score Description
1 DLDH2_PSEPU 541 Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4

+6

Accession Score Description
1 RL1_PSEE4 419 50S ribosomal protein L1 OS=Pseudomonas entomophila (strain L48) GN=rplA PE=3 SV=1

-7

Accession Score Description
1 EFG1_PSEPK 337 Elongation factor G 1 OS=Pseudomonas putida (strain KT2440) GN=fusA PE=3 SV=1
Score Mass Matches Sequences emPAI
7.1 EFG1_PSEPK 337 79053 12 (8) 10 (6) 0.19
Elongation factor G 1 OS=Pseudomonas putida (strain KT2440) GN=fusA PE=3 SV=1

+12 peptide matches (10 non-duplicate, 2 duplicate)

9 subsets and intersections (114 subset proteins in total)

Score Mass Subset of
EFG_PSEF5 185 78977 7.1
Elongation factor G OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fusA PE=3 SV=1
EFG_PSE14 147 77465 7.1
Elongation factor G OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fusA PE=3 SV=1
5 samesets of EFG_PSE14
EFG_PSEU2 147 77378
Elongation factor G OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fusA PE=3 SV=1
EFG_PSEMY 147 79128
Elongation factor G OS=Pseudomonas mendocina (strain ymp) GN=fusA PE=3 SV=1
EFG_PSEFS 147 77399
Elongation factor G OS=Pseudomonas fluorescens (strain SBW25) GN=fusA PE=3 SV=1
EFG_PSEPF 147 77489
Elongation factor G OS=Pseudomonas fluorescens (strain Pf0-1) GN=fusA PE=3 SV=1
EFG_PSESM 147 77406
Elongation factor G OS=Pseudomonas syringae pv. tomato GN=fusA PE=3 SV=1
EFG_DICNV 131 77910 7.1
Elongation factor G OS=Dichelobacter nodosus (strain VCS1703A) GN=fusA PE=3 SV=1
EFG_IDILO 129 78421 7.1
Elongation factor G OS=Idiomarina loihiensis GN=fusA PE=3 SV=1
EFG_ALCBS 93 77664 7.1
Elongation factor G OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fusA PE=3 SV=1
EFG1_VIBCH 90 77164 7.1
Elongation factor G 1 OS=Vibrio cholerae GN=fusA1 PE=3 SV=1
EFG1_PSEAE 90 78077 7.1
Elongation factor G 1 OS=Pseudomonas aeruginosa GN=fusA PE=3 SV=1
EFG_PSEU5 50 78200 7.1
Elongation factor G OS=Pseudomonas stutzeri (strain A1501) GN=fusA PE=3 SV=1
EFG1_BORA1 40 77364 7.1
Elongation factor G 1 OS=Bordetella avium (strain 197N) GN=fusA1 PE=3 SV=1
-100 samesets of EFG1_BORA1
EFG_COXBN 40 77941
Elongation factor G OS=Coxiella burnetii (strain Dugway 5J108-111) GN=fusA PE=3 SV=1
EFG_COXBR 40 77912
Elongation factor G OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=fusA PE=3 SV=1
EFG_COXBU 40 77912
Elongation factor G OS=Coxiella burnetii GN=fusA PE=3 SV=1
EFG_TERTT 40 77709
Elongation factor G OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=fusA PE=3 SV=1
EFG_COXB1 40 77926
Elongation factor G OS=Coxiella burnetii (strain CbuK_Q154) GN=fusA PE=3 SV=1
EFG_COXB2 40 77939
Elongation factor G OS=Coxiella burnetii (strain CbuG_Q212) GN=fusA PE=3 SV=1
EFG2_RALSO 40 77798
Elongation factor G 2 OS=Ralstonia solanacearum GN=fusB PE=3 SV=1
EFG_METFK 40 77557
Elongation factor G OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=fusA PE=3 SV=1
EFG1_BURXL 40 77869
Elongation factor G 1 OS=Burkholderia xenovorans (strain LB400) GN=fusA1 PE=3 SV=1
EFG2_PSEAE 40 77696
Elongation factor G 2 OS=Pseudomonas aeruginosa GN=fusB PE=3 SV=1
EFG_ACIF2 40 76792
Elongation factor G OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=fusA PE=3 SV=1
EFG_ACIF5 40 76792
Elongation factor G OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=fusA PE=3 SV=1
EFG_ACTSZ 40 77590
Elongation factor G OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=fusA PE=3 SV=1
EFG_PARL1 40 77142
Elongation factor G OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=fusA PE=3 SV=1
EFG_POLNS 40 77612
Elongation factor G OS=Polynucleobacter necessarius (strain STIR1) GN=fusA PE=3 SV=1
EFG_POLSQ 40 77845
Elongation factor G OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=fusA PE=3 SV=1
EFG_AERHH 40 77735
Elongation factor G OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fusA PE=3 SV=1
EFG_BLOPB 40 78783
Elongation factor G OS=Blochmannia pennsylvanicus (strain BPEN) GN=fusA PE=3 SV=1
EFG_BORPE 40 77352
Elongation factor G OS=Bordetella pertussis GN=fusA PE=3 SV=1
EFG_CAMFF 40 77065
Elongation factor G OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=fusA PE=3 SV=1
EFG_CAMHC 40 77116
Elongation factor G OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=fusA PE=3 SV=1
EFG_CAMJD 40 76982
Elongation factor G OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=fusA PE=3 SV=1
EFG_CAMJE 40 77013
Elongation factor G OS=Campylobacter jejuni GN=fusA PE=3 SV=1
EFG_CAMJJ 40 77039
Elongation factor G OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=fusA PE=3 SV=1
EFG_CAMJR 40 77013
Elongation factor G OS=Campylobacter jejuni (strain RM1221) GN=fusA PE=3 SV=1
EFG_CAMLR 40 77012
Elongation factor G OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=fusA PE=3 SV=1
EFG_CHRSD 40 78230
Elongation factor G OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fusA PE=3 SV=1
EFG_DECAR 40 77462
Elongation factor G OS=Dechloromonas aromatica (strain RCB) GN=fusA PE=3 SV=1
EFG_HAEDU 40 77316
Elongation factor G OS=Haemophilus ducreyi GN=fusA PE=3 SV=1
EFG_HAEIE 40 77395
Elongation factor G OS=Haemophilus influenzae (strain PittEE) GN=fusA PE=3 SV=1
EFG_HAEIN 40 77443
Elongation factor G OS=Haemophilus influenzae GN=fusA PE=3 SV=2
EFG_HAEPS 40 77308
Elongation factor G OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=fusA PE=3 SV=1
EFG_HALHL 40 77925
Elongation factor G OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=fusA PE=3 SV=1
EFG_LEGPA 40 77333
Elongation factor G OS=Legionella pneumophila (strain Paris) GN=fusA PE=3 SV=1
EFG_LEGPC 40 77299
Elongation factor G OS=Legionella pneumophila (strain Corby) GN=fusA PE=3 SV=1
EFG_LEGPH 40 77319
Elongation factor G OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=fusA PE=3 SV=1
EFG_LEGPL 40 77338
Elongation factor G OS=Legionella pneumophila (strain Lens) GN=fusA PE=3 SV=1
EFG_MANSM 40 77406
Elongation factor G OS=Mannheimia succiniciproducens (strain MBEL55E) GN=fusA PE=3 SV=1
EFG_MARAV 40 78096
Elongation factor G OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fusA PE=3 SV=1
EFG_METPP 40 77844
Elongation factor G OS=Methylibium petroleiphilum (strain PM1) GN=fusA PE=3 SV=1
EFG_NITEC 40 77162
Elongation factor G OS=Nitrosomonas eutropha (strain C91) GN=fusA PE=3 SV=1
EFG_NITEU 40 77334
Elongation factor G OS=Nitrosomonas europaea GN=fusA PE=3 SV=1
EFG_NITMU 40 77422
Elongation factor G OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=fusA PE=3 SV=1
EFG_PASMU 40 77423
Elongation factor G OS=Pasteurella multocida GN=fusA PE=3 SV=1
EFG_PHOLL 40 77820
Elongation factor G OS=Photorhabdus luminescens subsp. laumondii GN=fusA PE=3 SV=1
EFG_PROMH 40 78007
Elongation factor G OS=Proteus mirabilis (strain HI4320) GN=fusA PE=3 SV=1
EFG_SODGM 40 77889
Elongation factor G OS=Sodalis glossinidius (strain morsitans) GN=fusA PE=3 SV=1
EFG_STRMK 40 77977
Elongation factor G OS=Stenotrophomonas maltophilia (strain K279a) GN=fusA PE=3 SV=1
EFG_THIDA 40 77211
Elongation factor G OS=Thiobacillus denitrificans (strain ATCC 25259) GN=fusA PE=3 SV=1
EFG_TOLAT 40 77498
Elongation factor G OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=fusA PE=3 SV=1
EFG_VARPS 40 77467
Elongation factor G OS=Variovorax paradoxus (strain S110) GN=fusA PE=3 SV=1
EFG_XANAC 40 77757
Elongation factor G OS=Xanthomonas axonopodis pv. citri GN=fusA PE=3 SV=1
EFG_XANCB 40 77743
Elongation factor G OS=Xanthomonas campestris pv. campestris (strain B100) GN=fusA PE=3 SV=1
EFG_XANCP 40 77743
Elongation factor G OS=Xanthomonas campestris pv. campestris GN=fusA PE=3 SV=1
EFG_XANOM 40 77730
Elongation factor G OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=fusA PE=3 SV=1
EFG_XANOR 40 77730
Elongation factor G OS=Xanthomonas oryzae pv. oryzae GN=fusA PE=3 SV=2
EFG_XYLFA 40 78349
Elongation factor G OS=Xylella fastidiosa GN=fusA PE=3 SV=1
EFG_XYLFM 40 78406
Elongation factor G OS=Xylella fastidiosa (strain M12) GN=fusA PE=3 SV=1
EFG_XYLFT 40 78380
Elongation factor G OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=fusA PE=3 SV=1
EFG1_BORBR 40 77324
Elongation factor G 1 OS=Bordetella bronchiseptica GN=fusA1 PE=3 SV=1
EFG1_BORPA 40 77350
Elongation factor G 1 OS=Bordetella parapertussis GN=fusA1 PE=3 SV=1
EFG1_BURMA 40 77929
Elongation factor G 1 OS=Burkholderia mallei GN=fusA1 PE=3 SV=1
EFG1_BURP1 40 77944
Elongation factor G 1 OS=Burkholderia pseudomallei (strain 1710b) GN=fusA1 PE=3 SV=2
EFG1_BURPS 40 77929
Elongation factor G 1 OS=Burkholderia pseudomallei GN=fusA1 PE=3 SV=1
EFG1_BURS3 40 77713
Elongation factor G 1 OS=Burkholderia sp. (strain 383) GN=fusA1 PE=3 SV=1
EFG1_BURTA 40 78045
Elongation factor G 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=fusA1 PE=3 SV=1
EFG1_HAHCH 40 77325
Elongation factor G 1 OS=Hahella chejuensis (strain KCTC 2396) GN=fusA1 PE=3 SV=1
EFG1_POLSJ 40 77790
Elongation factor G 1 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=fusA1 PE=3 SV=1
EFG1_SACD2 40 77497
Elongation factor G 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fusA1 PE=3 SV=1
EFG_CAMC1 40 77395
Elongation factor G OS=Campylobacter concisus (strain 13826) GN=fusA PE=3 SV=1
EFG_HAES1 40 77327
Elongation factor G OS=Haemophilus somnus (strain 129Pt) GN=fusA PE=3 SV=1
EFG2_BORA1 40 78100
Elongation factor G 2 OS=Bordetella avium (strain 197N) GN=fusA2 PE=3 SV=1
EFG2_BORBR 40 78401
Elongation factor G 2 OS=Bordetella bronchiseptica GN=fusA2 PE=3 SV=1
EFG2_BORPA 40 78144
Elongation factor G 2 OS=Bordetella parapertussis GN=fusA2 PE=3 SV=1
EFG2_BURCA 40 77798
Elongation factor G 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=fusA2 PE=3 SV=1
EFG2_BURMA 40 77739
Elongation factor G 2 OS=Burkholderia mallei GN=fusA2 PE=3 SV=1
EFG2_BURP1 40 77739
Elongation factor G 2 OS=Burkholderia pseudomallei (strain 1710b) GN=fusA2 PE=3 SV=1
EFG2_BURPS 40 77739
Elongation factor G 2 OS=Burkholderia pseudomallei GN=fusA2 PE=3 SV=1
EFG2_BURS3 40 77568
Elongation factor G 2 OS=Burkholderia sp. (strain 383) GN=fusA2 PE=3 SV=1
EFG2_BURTA 40 77739
Elongation factor G 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=fusA2 PE=3 SV=1
EFG2_BURXL 40 77850
Elongation factor G 2 OS=Burkholderia xenovorans (strain LB400) GN=fusA2 PE=3 SV=1
EFG2_METCA 40 77020
Elongation factor G 2 OS=Methylococcus capsulatus GN=fusA2 PE=3 SV=1
EFG2_POLSJ 40 77936
Elongation factor G 2 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=fusA2 PE=3 SV=1
EFG2_PSEPK 40 78011
Elongation factor G 2 OS=Pseudomonas putida (strain KT2440) GN=fusB PE=3 SV=1
EFG2_RALEJ 40 77271
Elongation factor G 2 OS=Ralstonia eutropha (strain JMP134) GN=fusA2 PE=3 SV=1
EFG2_RALME 40 77392
Elongation factor G 2 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=fusA2 PE=3 SV=1
EFG_ACTP2 40 77515
Elongation factor G OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=fusA PE=3 SV=1
EFG_HAES2 40 77327
Elongation factor G OS=Haemophilus somnus (strain 2336) GN=fusA PE=3 SV=1
EFG_XYLF2 40 78380
Elongation factor G OS=Xylella fastidiosa (strain M23) GN=fusA PE=3 SV=1
EFG_AERS4 40 77676
Elongation factor G OS=Aeromonas salmonicida (strain A449) GN=fusA PE=3 SV=2
EFG_CAMC5 40 77572
Elongation factor G OS=Campylobacter curvus (strain 525.92) GN=fusA PE=3 SV=1
EFG_STRM5 40 78190
Elongation factor G OS=Stenotrophomonas maltophilia (strain R551-3) GN=fusA PE=3 SV=1
EFG_XANC5 40 77785
Elongation factor G OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=fusA PE=3 SV=1
EFG_CAMJ8 40 77013
Elongation factor G OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=fusA PE=3 SV=1
EFG_HAEI8 40 77409
Elongation factor G OS=Haemophilus influenzae (strain 86-028NP) GN=fusA PE=3 SV=1
EFG_XANC8 40 77743
Elongation factor G OS=Xanthomonas campestris pv. campestris (strain 8004) GN=fusA PE=3 SV=1
EFG_BURM9 40 77739
Elongation factor G OS=Burkholderia mallei (strain NCTC 10229) GN=fusA PE=3 SV=1
EFG_MAGSM 40 76966
Elongation factor G OS=Magnetococcus sp. (strain MC-1) GN=fusA PE=3 SV=1
EFG_RHOFD 40 78033
Elongation factor G OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=fusA PE=3 SV=1
EFG1_BURCA 40 77755
Elongation factor G 1 OS=Burkholderia cenocepacia (strain AU 1054) GN=fusA1 PE=3 SV=2

+8

Accession Score Description
1 RS5_PSEE4 331 30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1

+9

Accession Score Description
Family member distances as a dendrogram 1 RL4_PSE14 327 50S ribosomal protein L4 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplD PE=3 SV=1
2 RL4_PSEE4 318 50S ribosomal protein L4 OS=Pseudomonas entomophila (strain L48) GN=rplD PE=3 SV=1

+10

Accession Score Description
1 RL18_PSEP1 310 50S ribosomal protein L18 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplR PE=3 SV=1
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