MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita2 sp |
| MS data file | : | PRT1270_T-BRSC_2_20250714115216.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:39:15 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,778 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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51| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACP_PSEPK | 108 | Acyl carrier protein OS=Pseudomonas putida (strain KT2440) GN=acpP PE=3 SV=1 |
52| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS9_PSEE4 | 102 | 30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1 |
53| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | LEU1_PSEP1 | 97 | 2-isopropylmalate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=leuA PE=3 SV=1 |
54| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | IF2_CAMHC | 96 | Translation initiation factor IF-2 OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=infB PE=3 SV=1 |
55| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DHSB_ECOLI | 95 | Succinate dehydrogenase iron-sulfur subunit OS=Escherichia coli (strain K12) GN=sdhB PE=1 SV=1 |
56| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPG_PSEPG | 95 | ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 |
57| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL7_PSEP1 | 90 | 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplL PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 57.1 | RL7_PSEP1 |
90 | 12592 | 4 (2) | 3 (1) | 0.19 | |
| 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplL PE=3 SV=1 | |||||||
| 5 samesets of RL7_PSEP1 | |||||||
| RL7_PSEPF |
90 | 12606 | 4 (2) | 3 (1) | 0.19 | ||
| 50S ribosomal protein L7/L12 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplL PE=3 SV=1 | |||||||
| RL7_PSEPG |
90 | 12592 | 4 (2) | 3 (1) | 0.19 | ||
| 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain GB-1) GN=rplL PE=3 SV=1 | |||||||
| RL7_PSEPK |
90 | 12592 | 4 (2) | 3 (1) | 0.19 | ||
| 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain KT2440) GN=rplL PE=3 SV=2 | |||||||
| RL7_PSEPU |
90 | 12592 | 4 (2) | 3 (1) | 0.19 | ||
| 50S ribosomal protein L7/L12 OS=Pseudomonas putida GN=rplL PE=3 SV=2 | |||||||
| RL7_PSEPW |
90 | 12592 | 4 (2) | 3 (1) | 0.19 | ||
| 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain W619) GN=rplL PE=3 SV=1 | |||||||
4 peptide matches (3 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 239 |
517.3022 | 516.2949 | 516.2907 | 8.10 | 0 | 19 | 1.6 | 9Score > 48 indicates identity Score > 34 indicates homology |
E.AIGQK.T + Deamidated (NQ) | ||
| 283 |
572.3787 | 571.3714 | 571.3693 | 3.65 | 0 | 27 | 0.43 | 1Score > 40 indicates identity Score > 35 indicates homology |
K.VNVIK.A | ||
| 2005 |
1 |
678.3642 | 1354.7138 | 1354.7093 | 3.39 | 1 | 72 | 3.2e-005 | 1Score > 40 indicates identity |
U | K.VDGAPQVVAEGVSK.E |
58| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CYOA_PSEPU | 87 | Ubiquinol oxidase subunit 2 OS=Pseudomonas putida GN=cyoA PE=3 SV=1 |
59| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | KPRS_PSEPK | 86 | Ribose-phosphate pyrophosphokinase OS=Pseudomonas putida (strain KT2440) GN=prs PE=3 SV=1 |
60| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACCA_PSEPK | 86 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=accA PE=3 SV=1 |
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