MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita2 sp |
| MS data file | : | PRT1270_T-BRSC_2_20250714115216.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:39:15 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,778 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
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51| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACP_PSEPK | 108 | Acyl carrier protein OS=Pseudomonas putida (strain KT2440) GN=acpP PE=3 SV=1 |
52| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS9_PSEE4 | 102 | 30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 52.1 | RS9_PSEE4 |
102 | 14597 | 9 (6) | 3 (3) | 1.12 | |
| 30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1 | |||||||
| 3 samesets of RS9_PSEE4 | |||||||
| RS9_PSEP1 |
102 | 14583 | 9 (6) | 3 (3) | 1.13 | ||
| 30S ribosomal protein S9 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsI PE=3 SV=1 | |||||||
| RS9_PSEPG |
102 | 14597 | 9 (6) | 3 (3) | 1.12 | ||
| 30S ribosomal protein S9 OS=Pseudomonas putida (strain GB-1) GN=rpsI PE=3 SV=1 | |||||||
| RS9_PSEPK |
102 | 14583 | 9 (6) | 3 (3) | 1.13 | ||
| 30S ribosomal protein S9 OS=Pseudomonas putida (strain KT2440) GN=rpsI PE=3 SV=1 | |||||||
9 peptide matches (6 non-duplicate, 3 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1073 |
2 |
470.7520 | 939.4894 | 939.4814 | 8.53 | 0 | 43 | 0.0091 | 1Score > 39 indicates identity Score > 35 indicates homology |
U | R.SLDVFFGR.E |
| 1076 |
940.4989 | 939.4916 | 939.4814 | 10.9 | 0 | 25 | 0.13 | 1Score > 39 indicates identity Score > 29 indicates homology |
U | R.SLDVFFGR.E | |
| 1361 |
1 |
527.7523 | 1053.4900 | 1053.4839 | 5.81 | 0 | 52 | 0.00083 | 1Score > 40 indicates identity Score > 34 indicates homology |
U | M.SATQNYGTGR.R |
| 2649 |
553.3107 | 1656.9103 | 1656.9060 | 2.59 | 0 | 39 | 0.0023 | 1Score > 37 indicates identity Score > 26 indicates homology |
U | R.VFLRPGTGNISINNR.S | |
| 2650 |
829.4631 | 1656.9116 | 1656.9060 | 3.42 | 0 | 45 | 0.0025 | 1Score > 37 indicates identity Score > 31 indicates homology |
U | R.VFLRPGTGNISINNR.S | |
| 2652 |
553.6462 | 1657.9168 | 1657.8900 | 16.2 | 0 | 29 | 0.02 | 1Score > 37 indicates identity Score > 25 indicates homology |
U | R.VFLRPGTGNISINNR.S + Deamidated (NQ) |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RS9_PSE14 |
93 | 14593 | 52.1 | ||
| 30S ribosomal protein S9 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsI PE=3 SV=1 | |||||
| 6 samesets of RS9_PSE14 | |||||
| RS9_PSEF5 |
93 | 14610 | |||
| 30S ribosomal protein S9 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEFS |
93 | 14607 | |||
| 30S ribosomal protein S9 OS=Pseudomonas fluorescens (strain SBW25) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEMY |
93 | 14637 | |||
| 30S ribosomal protein S9 OS=Pseudomonas mendocina (strain ymp) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEPF |
93 | 14597 | |||
| 30S ribosomal protein S9 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSESM |
93 | 14593 | |||
| 30S ribosomal protein S9 OS=Pseudomonas syringae pv. tomato GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEU2 |
93 | 14593 | |||
| 30S ribosomal protein S9 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpsI PE=3 SV=1 | |||||
| RS9_AZOVD |
66 | 14723 | 52.1 | ||
| 30S ribosomal protein S9 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rpsI PE=3 SV=1 | |||||
| 6 samesets of RS9_AZOVD | |||||
| RS9_PSEA7 |
66 | 14616 | |||
| 30S ribosomal protein S9 OS=Pseudomonas aeruginosa (strain PA7) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEA8 |
66 | 14606 | |||
| 30S ribosomal protein S9 OS=Pseudomonas aeruginosa (strain LESB58) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEAB |
66 | 14606 | |||
| 30S ribosomal protein S9 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEAE |
66 | 14606 | |||
| 30S ribosomal protein S9 OS=Pseudomonas aeruginosa GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEPW |
66 | 14581 | |||
| 30S ribosomal protein S9 OS=Pseudomonas putida (strain W619) GN=rpsI PE=3 SV=1 | |||||
| RS9_PSEU5 |
66 | 14604 | |||
| 30S ribosomal protein S9 OS=Pseudomonas stutzeri (strain A1501) GN=rpsI PE=3 SV=1 | |||||
53| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | LEU1_PSEP1 | 97 | 2-isopropylmalate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=leuA PE=3 SV=1 |
54| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | IF2_CAMHC | 96 | Translation initiation factor IF-2 OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=infB PE=3 SV=1 |
55| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DHSB_ECOLI | 95 | Succinate dehydrogenase iron-sulfur subunit OS=Escherichia coli (strain K12) GN=sdhB PE=1 SV=1 |
56| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPG_PSEPG | 95 | ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1 |
57| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL7_PSEP1 | 90 | 50S ribosomal protein L7/L12 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplL PE=3 SV=1 |
58| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CYOA_PSEPU | 87 | Ubiquinol oxidase subunit 2 OS=Pseudomonas putida GN=cyoA PE=3 SV=1 |
59| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | KPRS_PSEPK | 86 | Ribose-phosphate pyrophosphokinase OS=Pseudomonas putida (strain KT2440) GN=prs PE=3 SV=1 |
60| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ACCA_PSEPK | 86 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=accA PE=3 SV=1 |
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