MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita2 sp |
| MS data file | : | PRT1270_T-BRSC_2_20250714115216.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:39:15 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,778 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
21| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOA_PSEPK | 230 | DNA-directed RNA polymerase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=rpoA PE=3 SV=1 |
22| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OTCC_PSEPK | 229 | Ornithine carbamoyltransferase, catabolic OS=Pseudomonas putida (strain KT2440) GN=arcB PE=3 SV=3 |
23| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ADHP_ECOLI | 207 | Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1 |
24| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL3_PSEE4 | 193 | 50S ribosomal protein L3 OS=Pseudomonas entomophila (strain L48) GN=rplC PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 24.1 | RL3_PSEE4 |
193 | 22600 | 13 (7) | 7 (4) | 0.80 | |
| 50S ribosomal protein L3 OS=Pseudomonas entomophila (strain L48) GN=rplC PE=3 SV=1 | |||||||
| 4 samesets of RL3_PSEE4 | |||||||
| RL3_PSEP1 |
193 | 22703 | 13 (7) | 7 (4) | 0.80 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplC PE=3 SV=1 | |||||||
| RL3_PSEPG |
193 | 22703 | 13 (7) | 7 (4) | 0.80 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain GB-1) GN=rplC PE=3 SV=1 | |||||||
| RL3_PSEPK |
193 | 22703 | 13 (7) | 7 (4) | 0.80 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain KT2440) GN=rplC PE=3 SV=2 | |||||||
| RL3_PSEPW |
193 | 22663 | 13 (7) | 7 (4) | 0.80 | ||
| 50S ribosomal protein L3 OS=Pseudomonas putida (strain W619) GN=rplC PE=3 SV=1 | |||||||
13 peptide matches (10 non-duplicate, 3 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 485 |
347.2015 | 692.3884 | 692.3857 | 3.93 | 0 | 14 | 1.6 | 2Score > 39 indicates identity Score > 28 indicates homology |
K.GFAGTIK.R | ||
| 717 |
397.2050 | 792.3954 | 792.3919 | 4.51 | 1 | 12 | 1.2 | 2Score > 42 indicates identity Score > 25 indicates homology |
R.GVWEFR.L | ||
| 1135 |
1 |
479.7721 | 957.5296 | 957.5244 | 5.53 | 1 | 40 | 0.055 | 1Score > 41 indicates identity Score > 40 indicates homology |
R.AVQVTVGER.R | |
| 1451 |
1 |
367.5343 | 1099.5811 | 1099.5774 | 3.30 | 0 | 30 | 0.22 | 1Score > 41 indicates identity Score > 36 indicates homology |
U | R.VTAAQAGHFAK.A |
| 1452 |
551.2951 | 1100.5756 | 1100.5614 | 12.9 | 0 | 39 | 0.0097 | 1Score > 41 indicates identity Score > 32 indicates homology |
U | R.VTAAQAGHFAK.A + Deamidated (NQ) | |
| 1511 |
1 |
565.3362 | 1128.6578 | 1128.6503 | 6.70 | 1 | 51 | 0.0028 | 1Score > 38 indicates identity |
U | R.VTVQSLEVVR.V |
| 2630 |
825.4730 | 1648.9314 | 1648.9261 | 3.25 | 0 | 75 | 5.4e-006 | 1Score > 34 indicates identity |
U | K.GAVPGATGGDVVVRPAVK.A | |
| 2631 |
550.6519 | 1648.9339 | 1648.9261 | 4.72 | 0 | 47 | 0.0032 | 1Score > 34 indicates identity |
U | K.GAVPGATGGDVVVRPAVK.A | |
| 2844 |
588.6498 | 1762.9276 | 1762.9101 | 9.89 | 1 | 24 | 0.032 | 1Score > 39 indicates identity Score > 21 indicates homology |
U | K.AELFTAGQLVDVTGQSK.G | |
| 2845 |
882.4714 | 1762.9282 | 1762.9101 | 10.3 | 1 | 105 | 1.9e-009 | 1Score > 39 indicates identity Score > 30 indicates homology |
U | K.AELFTAGQLVDVTGQSK.G |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL3_PSEF5 |
66 | 22646 | 24.1 | ||
| 50S ribosomal protein L3 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplC PE=3 SV=1 | |||||
| 4 samesets of RL3_PSEF5 | |||||
| RL3_PSEFS |
66 | 22664 | |||
| 50S ribosomal protein L3 OS=Pseudomonas fluorescens (strain SBW25) GN=rplC PE=3 SV=1 | |||||
| RL3_PSEPF |
66 | 22603 | |||
| 50S ribosomal protein L3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplC PE=3 SV=1 | |||||
| RL3_PSESM |
66 | 22707 | |||
| 50S ribosomal protein L3 OS=Pseudomonas syringae pv. tomato GN=rplC PE=3 SV=1 | |||||
| RL3_PSEU2 |
66 | 22693 | |||
| 50S ribosomal protein L3 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplC PE=3 SV=1 | |||||
| RL3_ACTP2 |
61 | 22369 | 24.1 | ||
| 50S ribosomal protein L3 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rplC PE=3 SV=1 | |||||
| 16 samesets of RL3_ACTP2 | |||||
| RL3_PSEMY |
61 | 22536 | |||
| 50S ribosomal protein L3 OS=Pseudomonas mendocina (strain ymp) GN=rplC PE=3 SV=1 | |||||
| RL3_ACTP7 |
61 | 22369 | |||
| 50S ribosomal protein L3 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rplC PE=3 SV=1 | |||||
| RL3_ACTPJ |
61 | 22369 | |||
| 50S ribosomal protein L3 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rplC PE=3 SV=1 | |||||
| RL3_ACTSZ |
61 | 22312 | |||
| 50S ribosomal protein L3 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rplC PE=3 SV=1 | |||||
| RL3_AGGAC |
61 | 12929 | |||
| 50S ribosomal protein L3 (Fragment) OS=Aggregatibacter actinomycetemcomitans GN=rplC PE=3 SV=1 | |||||
| RL3_BUCA5 |
61 | 22903 | |||
| 50S ribosomal protein L3 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rplC PE=3 SV=1 | |||||
| RL3_BUCAI |
61 | 22884 | |||
| 50S ribosomal protein L3 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rplC PE=3 SV=1 | |||||
| RL3_BUCAT |
61 | 22903 | |||
| 50S ribosomal protein L3 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rplC PE=3 SV=1 | |||||
| RL3_HAEDU |
61 | 22295 | |||
| 50S ribosomal protein L3 OS=Haemophilus ducreyi GN=rplC PE=3 SV=1 | |||||
| RL3_HAEI8 |
61 | 22350 | |||
| 50S ribosomal protein L3 OS=Haemophilus influenzae (strain 86-028NP) GN=rplC PE=3 SV=1 | |||||
| RL3_HAEIG |
61 | 22349 | |||
| 50S ribosomal protein L3 OS=Haemophilus influenzae (strain PittGG) GN=rplC PE=3 SV=1 | |||||
| RL3_HAEIN |
61 | 22350 | |||
| 50S ribosomal protein L3 OS=Haemophilus influenzae GN=rplC PE=3 SV=1 | |||||
| RL3_HAEPS |
61 | 22385 | |||
| 50S ribosomal protein L3 OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=rplC PE=3 SV=1 | |||||
| RL3_MANSM |
61 | 22326 | |||
| 50S ribosomal protein L3 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rplC PE=3 SV=1 | |||||
| RL3_PASMU |
61 | 22369 | |||
| 50S ribosomal protein L3 OS=Pasteurella multocida GN=rplC PE=3 SV=1 | |||||
| RL3_TOLAT |
61 | 22710 | |||
| 50S ribosomal protein L3 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rplC PE=3 SV=1 | |||||
| RL3_PSE14 |
39 | 22707 | 24.1 | ||
| 50S ribosomal protein L3 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplC PE=3 SV=1 | |||||
25| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PORF_PSEAE | 190 | Outer membrane porin F OS=Pseudomonas aeruginosa GN=oprF PE=1 SV=1 |
26| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL10_PSEPG | 183 | 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1 |
27| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS16_PSEP1 | 180 | 30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1 |
28| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCC_PSEPK | 176 | Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1 |
29| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | TIG_PSEPG | 172 | Trigger factor OS=Pseudomonas putida (strain GB-1) GN=tig PE=3 SV=1 |
30| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL5_PSEE4 | 166 | 50S ribosomal protein L5 OS=Pseudomonas entomophila (strain L48) GN=rplE PE=3 SV=1 |
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