MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita2 sp |
| MS data file | : | PRT1270_T-BRSC_2_20250714115216.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:39:15 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,778 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
21| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RPOA_PSEPK | 230 | DNA-directed RNA polymerase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=rpoA PE=3 SV=1 |
22| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OTCC_PSEPK | 229 | Ornithine carbamoyltransferase, catabolic OS=Pseudomonas putida (strain KT2440) GN=arcB PE=3 SV=3 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 22.1 | OTCC_PSEPK |
229 | 38115 | 27 (18) | 10 (7) | 0.91 | |
| Ornithine carbamoyltransferase, catabolic OS=Pseudomonas putida (strain KT2440) GN=arcB PE=3 SV=3 | |||||||
27 peptide matches (16 non-duplicate, 11 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
| 218 |
499.3257 | 498.3184 | 498.3166 | 3.74 | 0 | 35 | 0.042 | 1Score > 34 indicates identity |
U | R.IAAPK.A | |
| 482 |
345.6848 | 689.3550 | 689.3530 | 2.91 | 0 | 25 | 0.28 | 1Score > 43 indicates identity Score > 32 indicates homology |
K.LGMDVR.I | ||
| 896 |
1 |
436.2323 | 870.4500 | 870.4460 | 4.63 | 0 | 28 | 0.13 | 1Score > 39 indicates identity Score > 32 indicates homology |
M.AFNIHNR.N | |
| 916 |
440.2535 | 878.4924 | 878.4861 | 7.17 | 0 | 34 | 0.14 | 5Score > 38 indicates identity |
U | R.YLLDLSR.D | |
| 918 |
879.5005 | 878.4932 | 878.4861 | 8.06 | 0 | 41 | 0.024 | 1Score > 37 indicates identity |
U | R.YLLDLSR.D | |
| 1005 |
1 |
458.7545 | 915.4944 | 915.4913 | 3.44 | 1 | 41 | 0.022 | 1Score > 43 indicates identity Score > 37 indicates homology |
U | R.ITLTEDPK.A |
| 1283 |
2 |
1015.6138 | 1014.6065 | 1014.5961 | 10.3 | 0 | 13 | 0.71 | 1Score > 37 indicates identity Score > 24 indicates homology |
U | K.AILVSTLADL.- |
| 1285 |
508.3112 | 1014.6078 | 1014.5961 | 11.6 | 0 | 11 | 0.82 | 1Score > 37 indicates identity Score > 23 indicates homology |
U | K.AILVSTLADL.- | |
| 1479 |
1 |
559.8199 | 1117.6252 | 1117.6131 | 10.8 | 1 | 51 | 0.0012 | 1Score > 39 indicates identity Score > 34 indicates homology |
U | K.GNNIALIFEK.T |
| 1682 |
402.2050 | 1203.5932 | 1203.5884 | 3.97 | 1 | 43 | 0.00051 | 1Score > 42 indicates identity Score > 23 indicates homology |
U | K.YTGTEQQHLK.G | |
| 1683 |
602.8041 | 1203.5936 | 1203.5884 | 4.37 | 1 | 45 | 0.0027 | 1Score > 42 indicates identity Score > 32 indicates homology |
U | K.YTGTEQQHLK.G | |
| 1923 |
660.8563 | 1319.6980 | 1319.6946 | 2.63 | 1 | 39 | 0.0019 | 1Score > 41 indicates identity Score > 24 indicates homology |
U | R.NLLSLEHHTTR.E | |
| 1924 |
1 |
330.9319 | 1319.6985 | 1319.6946 | 2.97 | 1 | 44 | 0.0035 | 1Score > 41 indicates identity Score > 32 indicates homology |
U | R.NLLSLEHHTTR.E |
| 1926 |
2 |
440.9074 | 1319.7004 | 1319.6946 | 4.39 | 1 | 38 | 0.0025 | 1Score > 40 indicates identity Score > 24 indicates homology |
U | R.NLLSLEHHTTR.E |
| 1987 |
2 |
450.9001 | 1349.6785 | 1349.6728 | 4.21 | 1 | 44 | 0.001 | 1Score > 41 indicates identity Score > 26 indicates homology |
U | K.ALWPHDDLVER.C |
| 1988 |
1 |
675.8475 | 1349.6804 | 1349.6728 | 5.67 | 1 | 38 | 0.0038 | 1Score > 41 indicates identity Score > 26 indicates homology |
U | K.ALWPHDDLVER.C |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| OTCC_PSEAE |
75 | 38255 | 22.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Pseudomonas aeruginosa GN=arcB PE=1 SV=3 | |||||
| 1 sameset of OTCC_PSEAE | |||||
| OTCC_PSEME |
75 | 38189 | |||
| Ornithine carbamoyltransferase, catabolic OS=Pseudomonas mendocina GN=arcB PE=3 SV=3 | |||||
| OTCC_CHRVO |
45 | 38025 | 22.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Chromobacterium violaceum GN=arcB PE=3 SV=1 | |||||
| OTCC_HAEIN |
41 | 37908 | 22.1 | ||
| Ornithine carbamoyltransferase, catabolic OS=Haemophilus influenzae GN=arcB PE=3 SV=1 | |||||
| 3 samesets of OTCC_HAEIN | |||||
| OTC_HAEIG |
41 | 37881 | |||
| Ornithine carbamoyltransferase OS=Haemophilus influenzae (strain PittGG) GN=arcB PE=3 SV=1 | |||||
| OTCC_MYCCC |
41 | 35232 | |||
| Ornithine carbamoyltransferase, catabolic OS=Mycoplasma capricolum subsp. capripneumoniae GN=arcB PE=3 SV=1 | |||||
| THI22_YEAST |
41 | 64521 | |||
| Thiamine biosynthesis protein THI22 OS=Saccharomyces cerevisiae GN=THI22 PE=2 SV=1 | |||||
| AMN1_PICAN |
35 | 0 | 22.1 | ||
| description | |||||
| 19 samesets of AMN1_PICAN | |||||
| SYA_IGNH4 |
35 | 0 | |||
| description | |||||
| CIPKB_ORYSJ |
35 | 0 | |||
| description | |||||
| YHC3_SCHPO |
35 | 0 | |||
| description | |||||
| UNC53_CAEEL |
35 | 0 | |||
| description | |||||
| DNAE2_RALPJ |
35 | 0 | |||
| description | |||||
| CHDM_DROME |
35 | 0 | |||
| description | |||||
| FAS_RAT |
35 | 0 | |||
| description | |||||
| GB_MCMVS |
35 | 0 | |||
| description | |||||
| MURI_LACAC |
35 | 0 | |||
| description | |||||
| OTC_CLOAB |
35 | 0 | |||
| description | |||||
| THEG_HUMAN |
35 | 0 | |||
| description | |||||
| BOP1_DICDI |
35 | 0 | |||
| description | |||||
| DOP1_EMENI |
35 | 0 | |||
| description | |||||
| IML1_NEUCR |
35 | 0 | |||
| description | |||||
| DNAE2_RALSO |
35 | 0 | |||
| description | |||||
| IMPA3_MOUSE |
35 | 0 | |||
| description | |||||
| RL3_SPHWW |
35 | 0 | |||
| description | |||||
| RS4_DROME |
35 | 0 | |||
| description | |||||
| RL32_CARHZ |
35 | 0 | |||
| description | |||||
23| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ADHP_ECOLI | 207 | Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1 |
24| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL3_PSEE4 | 193 | 50S ribosomal protein L3 OS=Pseudomonas entomophila (strain L48) GN=rplC PE=3 SV=1 |
25| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PORF_PSEAE | 190 | Outer membrane porin F OS=Pseudomonas aeruginosa GN=oprF PE=1 SV=1 |
26| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL10_PSEPG | 183 | 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1 |
27| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS16_PSEP1 | 180 | 30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1 |
28| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | SUCC_PSEPK | 176 | Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain KT2440) GN=sucC PE=3 SV=1 |
29| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | TIG_PSEPG | 172 | Trigger factor OS=Pseudomonas putida (strain GB-1) GN=tig PE=3 SV=1 |
30| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL5_PSEE4 | 166 | 50S ribosomal protein L5 OS=Pseudomonas entomophila (strain L48) GN=rplE PE=3 SV=1 |
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