MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita2 sp |
| MS data file | : | PRT1270_T-BRSC_2_20250714115216.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 23:39:15 GMT |
Not what you expected? Try 
the select summary.
| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,778 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
1| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFTU2_PSEPK | 1121 | Elongation factor Tu-B OS=Pseudomonas putida (strain KT2440) GN=tufB PE=3 SV=1 | |
| 6 | EFTU_CYAP7 | 40 | Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1 | |
| 5 | EFTU_ANATD | 50 | Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1 | |
| 3 | EFTU_PSEFS | 701 | Elongation factor Tu OS=Pseudomonas fluorescens (strain SBW25) GN=tuf PE=3 SV=1 | |
| 2 | EFTU1_PSEPK | 1002 | Elongation factor Tu-A OS=Pseudomonas putida (strain KT2440) GN=tufA PE=3 SV=1 | |
| 4 | EFTU_CARRP | 145 | Elongation factor Tu OS=Carsonella ruddii (strain PV) GN=tuf PE=3 SV=1 | |
2| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPB_PSEPG | 972 | ATP synthase subunit beta OS=Pseudomonas putida (strain GB-1) GN=atpD PE=3 SV=1 |
3| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ATPA_PSEPK | 749 | ATP synthase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=atpA PE=3 SV=1 | |
| 2 | ATPA_RICAH | 179 | ATP synthase subunit alpha OS=Rickettsia akari (strain Hartford) GN=atpA PE=3 SV=1 | |
| 3 | ATPA_VEREI | 174 | ATP synthase subunit alpha OS=Verminephrobacter eiseniae (strain EF01-2) GN=atpA PE=3 SV=1 | |
4| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CH60_PSEPK | 584 | 60 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groL PE=3 SV=1 | |
| 3 | CH602_SORC5 | 80 | 60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1 | |
| 2 | CH601_ECOK1 | 123 | 60 kDa chaperonin 1 OS=Escherichia coli O1:K1 / APEC GN=groL1 PE=3 SV=1 | |
5| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DLDH2_PSEPU | 541 | Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4 |
6| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL1_PSEE4 | 419 | 50S ribosomal protein L1 OS=Pseudomonas entomophila (strain L48) GN=rplA PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 6.1 | RL1_PSEE4 |
419 | 24208 | 13 (10) | 6 (4) | 0.73 | |
| 50S ribosomal protein L1 OS=Pseudomonas entomophila (strain L48) GN=rplA PE=3 SV=1 | |||||||
| 2 samesets of RL1_PSEE4 | |||||||
| RL1_PSEP1 |
419 | 24236 | 13 (10) | 6 (4) | 0.73 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplA PE=3 SV=1 | |||||||
| RL1_PSEPK |
419 | 24236 | 13 (10) | 6 (4) | 0.73 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain KT2440) GN=rplA PE=3 SV=1 | |||||||
13 peptide matches (9 non-duplicate, 4 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1300 |
342.5306 | 1024.5700 | 1024.5665 | 3.35 | 0 | 23 | 0.12 | 1Score > 37 indicates identity Score > 26 indicates homology |
U | K.NGIIHTSVGK.V | |
| 1386 |
356.5343 | 1066.5811 | 1066.5771 | 3.71 | 0 | 24 | 0.28 | 1Score > 38 indicates identity Score > 31 indicates homology |
U | R.SATVLPHGTGK.T | |
| 1725 |
2 |
611.8713 | 1221.7280 | 1221.7194 | 7.10 | 0 | 62 | 1.1e-005 | 1Score > 32 indicates identity Score > 25 indicates homology |
U | R.VVGQLGQVLGPR.G |
| 1724 |
611.8704 | 1221.7262 | 1221.7194 | 5.62 | 0 | (50) | 9.1e-005 | 1Score > 32 indicates identity Score > 23 indicates homology |
U | R.VVGQLGQVLGPR.G | |
| 1726 |
611.8724 | 1221.7302 | 1221.7194 | 8.90 | 0 | (46) | 0.00021 | 1Score > 32 indicates identity Score > 22 indicates homology |
U | R.VVGQLGQVLGPR.G | |
| 1799 |
629.3596 | 1256.7046 | 1256.6976 | 5.57 | 0 | 65 | 4.4e-005 | 1Score > 39 indicates identity Score > 34 indicates homology |
U | K.VGTVTPDVATAVK.N | |
| 2899 |
1 |
897.4658 | 1792.9170 | 1792.8996 | 9.75 | 1 | 45 | 0.00078 | 1Score > 40 indicates identity Score > 26 indicates homology |
U | K.FVESYDIAVNLGVDPR.K |
| 2900 |
598.6487 | 1792.9243 | 1792.8996 | 13.8 | 1 | 12 | 0.44 | 1Score > 40 indicates identity Score > 21 indicates homology |
U | K.FVESYDIAVNLGVDPR.K | |
| 3058 |
943.5013 | 1884.9880 | 1884.9694 | 9.91 | 1 | 128 | 1.3e-011 | 1Score > 39 indicates identity Score > 32 indicates homology |
U | R.VAVFTQGPAAEAALAAGADR.V | |
| 3060 |
1 |
629.3385 | 1884.9937 | 1884.9694 | 12.9 | 1 | 84 | 6.2e-007 | 1Score > 38 indicates identity Score > 34 indicates homology |
U | R.VAVFTQGPAAEAALAAGADR.V |
| 3061 |
944.0016 | 1885.9886 | 1885.9534 | 18.7 | 1 | 92 | 4.5e-008 | 1Score > 39 indicates identity Score > 31 indicates homology |
U | R.VAVFTQGPAAEAALAAGADR.V + Deamidated (NQ) |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL1_PSEPW |
394 | 24112 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain W619) GN=rplA PE=3 SV=1 | |||||
| 1 sameset of RL1_PSEPW | |||||
| RL1_PSESM |
394 | 24163 | |||
| 50S ribosomal protein L1 OS=Pseudomonas syringae pv. tomato GN=rplA PE=3 SV=1 | |||||
| RL1_PSEPG |
388 | 24180 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas putida (strain GB-1) GN=rplA PE=3 SV=1 | |||||
| RL1_PSE14 |
363 | 24120 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplA PE=3 SV=1 | |||||
| 2 samesets of RL1_PSE14 | |||||
| RL1_PSEF5 |
363 | 24047 | |||
| 50S ribosomal protein L1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplA PE=3 SV=1 | |||||
| RL1_PSEU2 |
363 | 24176 | |||
| 50S ribosomal protein L1 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplA PE=3 SV=1 | |||||
| RL1_PSEFS |
309 | 24061 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas fluorescens (strain SBW25) GN=rplA PE=3 SV=1 | |||||
| 1 sameset of RL1_PSEFS | |||||
| RL1_PSEPF |
309 | 24193 | |||
| 50S ribosomal protein L1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplA PE=3 SV=1 | |||||
| RL1_AZOVD |
277 | 24230 | 6.1 | ||
| 50S ribosomal protein L1 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rplA PE=3 SV=1 | |||||
| RL1_PSEMY |
145 | 23957 | 6.1 | ||
| 50S ribosomal protein L1 OS=Pseudomonas mendocina (strain ymp) GN=rplA PE=3 SV=1 | |||||
| 1 sameset of RL1_PSEMY | |||||
| RL1_PSEU5 |
145 | 24129 | |||
| 50S ribosomal protein L1 OS=Pseudomonas stutzeri (strain A1501) GN=rplA PE=3 SV=1 | |||||
| RL1_ACTP2 |
112 | 23932 | 6.1 | ||
| 50S ribosomal protein L1 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rplA PE=3 SV=1 | |||||
| 58 samesets of RL1_ACTP2 |
|||||
| RL1_ACIAC |
65 | 23909 | 6.1 | ||
| 50S ribosomal protein L1 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rplA PE=3 SV=1 | |||||
| 46 samesets of RL1_ACIAC |
|||||
7| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | EFG1_PSEPK | 337 | Elongation factor G 1 OS=Pseudomonas putida (strain KT2440) GN=fusA PE=3 SV=1 |
8| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS5_PSEE4 | 331 | 30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1 |
9| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL4_PSE14 | 327 | 50S ribosomal protein L4 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplD PE=3 SV=1 | |
| 2 | RL4_PSEE4 | 318 | 50S ribosomal protein L4 OS=Pseudomonas entomophila (strain L48) GN=rplD PE=3 SV=1 | |
10| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL18_PSEP1 | 310 | 50S ribosomal protein L18 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplR PE=3 SV=1 |
Not what you expected? Try the select summary.
Mascot: http://www.matrixscience.com/