MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita1 sp |
| MS data file | : | PRT1270_T-BRSC_1_20250714114344.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 22:50:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,938 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
61| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DHSB_ECOLI | 100 | Succinate dehydrogenase iron-sulfur subunit OS=Escherichia coli (strain K12) GN=sdhB PE=1 SV=1 |
62| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | BETI_PSEF5 | 99 | HTH-type transcriptional regulator betI OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betI PE=3 SV=1 |
63| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ILVC_PSEPG | 99 | Ketol-acid reductoisomerase OS=Pseudomonas putida (strain GB-1) GN=ilvC PE=3 SV=1 |
64| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL6_PSEP1 | 99 | 50S ribosomal protein L6 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplF PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 64.1 | RL6_PSEP1 |
99 | 19131 | 6 (3) | 6 (3) | 0.42 | |
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplF PE=3 SV=1 | |||||||
| 6 samesets of RL6_PSEP1 | |||||||
| RL6_PSEPG |
99 | 19131 | 6 (3) | 6 (3) | 0.42 | ||
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain GB-1) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEPK |
99 | 19131 | 6 (3) | 6 (3) | 0.42 | ||
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain KT2440) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEF5 |
99 | 19170 | 5 (3) | 5 (3) | 0.41 | ||
| 50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEFS |
99 | 19185 | 5 (3) | 5 (3) | 0.41 | ||
| 50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain SBW25) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEPF |
99 | 19184 | 5 (3) | 5 (3) | 0.41 | ||
| 50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplF PE=3 SV=1 | |||||||
| RL6_PSEPW |
99 | 19115 | 5 (3) | 5 (3) | 0.42 | ||
| 50S ribosomal protein L6 OS=Pseudomonas putida (strain W619) GN=rplF PE=3 SV=1 | |||||||
6 peptide matches (6 non-duplicate, 0 duplicate)| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL6_PSE14 |
86 | 19506 | 64.1 | ||
| 50S ribosomal protein L6 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplF PE=3 SV=1 | |||||
| 8 samesets of RL6_PSE14 | |||||
| RL6_PSESM |
86 | 19266 | |||
| 50S ribosomal protein L6 OS=Pseudomonas syringae pv. tomato GN=rplF PE=3 SV=1 | |||||
| RL6_PSEU2 |
86 | 19236 | |||
| 50S ribosomal protein L6 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEA7 |
86 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain PA7) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEA8 |
86 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEAB |
86 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEAE |
86 | 19087 | |||
| 50S ribosomal protein L6 OS=Pseudomonas aeruginosa GN=rplF PE=3 SV=1 | |||||
| RL6_PSEU5 |
86 | 19167 | |||
| 50S ribosomal protein L6 OS=Pseudomonas stutzeri (strain A1501) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEMY |
86 | 19130 | |||
| 50S ribosomal protein L6 OS=Pseudomonas mendocina (strain ymp) GN=rplF PE=3 SV=1 | |||||
| RL6_CHRVO |
69 | 18841 | 64.1 | ||
| 50S ribosomal protein L6 OS=Chromobacterium violaceum GN=rplF PE=3 SV=1 | |||||
| 3 samesets of RL6_CHRVO | |||||
| RL6_SHELP |
69 | 18777 | |||
| 50S ribosomal protein L6 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rplF PE=3 SV=1 | |||||
| RL6_SHESH |
69 | 18751 | |||
| 50S ribosomal protein L6 OS=Shewanella sediminis (strain HAW-EB3) GN=rplF PE=3 SV=1 | |||||
| RL6_SHEWM |
69 | 18852 | |||
| 50S ribosomal protein L6 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rplF PE=3 SV=1 | |||||
| RL6_PSEE4 |
68 | 19015 | 64.1 | ||
| 50S ribosomal protein L6 OS=Pseudomonas entomophila (strain L48) GN=rplF PE=3 SV=1 | |||||
| RL6_ACIB3 |
52 | 19085 | 64.1 | ||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain AB307-0294) GN=rplF PE=3 SV=1 | |||||
| 6 samesets of RL6_ACIB3 | |||||
| RL6_ACIB5 |
52 | 19085 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain AB0057) GN=rplF PE=3 SV=1 | |||||
| RL6_ACIBS |
52 | 19113 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain SDF) GN=rplF PE=3 SV=1 | |||||
| RL6_ACIBT |
52 | 19085 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rplF PE=3 SV=2 | |||||
| RL6_ACIBY |
52 | 19085 | |||
| 50S ribosomal protein L6 OS=Acinetobacter baumannii (strain AYE) GN=rplF PE=3 SV=1 | |||||
| RL6_AERHH |
52 | 18568 | |||
| 50S ribosomal protein L6 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rplF PE=3 SV=1 | |||||
| RL6_AERS4 |
52 | 18556 | |||
| 50S ribosomal protein L6 OS=Aeromonas salmonicida (strain A449) GN=rplF PE=3 SV=1 | |||||
65| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS7_PSEE4 | 99 | 30S ribosomal protein S7 OS=Pseudomonas entomophila (strain L48) GN=rpsG PE=3 SV=1 |
66| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OPRI_PSEAE | 99 | Major outer membrane lipoprotein OS=Pseudomonas aeruginosa GN=oprI PE=3 SV=1 |
67| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL25_PSEPK | 98 | 50S ribosomal protein L25 OS=Pseudomonas putida (strain KT2440) GN=rplY PE=3 SV=2 |
68| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | FTSA_PSEAE | 98 | Cell division protein ftsA OS=Pseudomonas aeruginosa GN=ftsA PE=3 SV=2 |
69| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL10_PSEPG | 97 | 50S ribosomal protein L10 OS=Pseudomonas putida (strain GB-1) GN=rplJ PE=3 SV=1 |
70| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | PCAB_PSEPU | 97 | 3-carboxy-cis,cis-muconate cycloisomerase (Fragment) OS=Pseudomonas putida GN=pcaB PE=1 SV=3 |
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