MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita1 sp |
| MS data file | : | PRT1270_T-BRSC_1_20250714114344.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 22:50:29 GMT |
Not what you expected? Try 
the select summary.
| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,938 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
Right-facing triangle () in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (
) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.
31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OXAA_PSEPK | 175 | Inner membrane protein oxaA OS=Pseudomonas putida (strain KT2440) GN=oxaA PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS3_PSEE4 | 173 | 30S ribosomal protein S3 OS=Pseudomonas entomophila (strain L48) GN=rpsC PE=3 SV=1 | |
| 2 | RS3_NITOC | 80 | 30S ribosomal protein S3 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rpsC PE=3 SV=1 | |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODO1_AZOVI | 172 | 2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii GN=sucA PE=3 SV=1 |
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS11_PSEE4 | 169 | 30S ribosomal protein S11 OS=Pseudomonas entomophila (strain L48) GN=rpsK PE=3 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS9_PSEE4 | 161 | 30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1 | |
| 2 | RS9_PSE14 | 90 | 30S ribosomal protein S9 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsI PE=3 SV=1 | |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RISB_PSEPG | 159 | 6,7-dimethyl-8-ribityllumazine synthase OS=Pseudomonas putida (strain GB-1) GN=ribH PE=3 SV=1 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CYOA_PSEPU | 155 | Ubiquinol oxidase subunit 2 OS=Pseudomonas putida GN=cyoA PE=3 SV=1 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | AROG_ECOLI | 155 | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive OS=Escherichia coli (strain K12) GN=aroG PE=1 SV=1 |
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL28_PSEP1 | 150 | 50S ribosomal protein L28 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpmB PE=3 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 39.1 | RL28_PSEP1 |
150 | 8974 | 6 (4) | 4 (2) | 1.06 | |
| 50S ribosomal protein L28 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpmB PE=3 SV=1 | |||||||
| 3 samesets of RL28_PSEP1 | |||||||
| RL28_PSEPG |
150 | 8974 | 6 (4) | 4 (2) | 1.06 | ||
| 50S ribosomal protein L28 OS=Pseudomonas putida (strain GB-1) GN=rpmB PE=3 SV=1 | |||||||
| RL28_PSEPK |
150 | 8974 | 6 (4) | 4 (2) | 1.06 | ||
| 50S ribosomal protein L28 OS=Pseudomonas putida (strain KT2440) GN=rpmB PE=3 SV=1 | |||||||
| RL28_PSEE4 |
150 | 8988 | 5 (4) | 3 (2) | 1.06 | ||
| 50S ribosomal protein L28 OS=Pseudomonas entomophila (strain L48) GN=rpmB PE=3 SV=1 | |||||||
6 peptide matches (5 non-duplicate, 1 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1286 |
1 |
535.8203 | 1069.6260 | 1069.6132 | 12.1 | 0 | 48 | 0.0052 | 1Score > 38 indicates identity |
U | R.GIDAVLVDIR.K |
| 1507 |
387.8816 | 1160.6230 | 1160.6203 | 2.30 | 0 | 7 | 1.4 | 7Score > 41 indicates identity Score > 21 indicates homology |
R.FLPNLQHHR.F | ||
| 1590 |
400.2456 | 1197.7150 | 1197.7081 | 5.73 | 1 | 28 | 0.34 | 1Score > 36 indicates identity Score > 35 indicates homology |
U | R.GIDAVLVDIRK.A | |
| 2024 |
474.9090 | 1421.7052 | 1421.7011 | 2.85 | 0 | 69 | 1.9e-006 | 1Score > 41 indicates identity Score > 25 indicates homology |
U | K.GPVTGNNISHANNK.T | |
| 2025 |
711.8599 | 1421.7052 | 1421.7011 | 2.90 | 0 | 97 | 5.3e-008 | 1Score > 41 indicates identity Score > 37 indicates homology |
U | K.GPVTGNNISHANNK.T |
| Score | Mass | Subset of | |||
|---|---|---|---|---|---|
| RL28_AZOVD |
135 | 9074 | 39.1 | ||
| 50S ribosomal protein L28 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rpmB PE=3 SV=1 | |||||
| 9 samesets of RL28_AZOVD | |||||
| RL28_PSE14 |
135 | 8987 | |||
| 50S ribosomal protein L28 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpmB PE=3 SV=1 | |||||
| RL28_PSEF5 |
135 | 9046 | |||
| 50S ribosomal protein L28 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpmB PE=3 SV=1 | |||||
| RL28_PSEFS |
135 | 8902 | |||
| 50S ribosomal protein L28 OS=Pseudomonas fluorescens (strain SBW25) GN=rpmB PE=3 SV=1 | |||||
| RL28_PSEMY |
135 | 9060 | |||
| 50S ribosomal protein L28 OS=Pseudomonas mendocina (strain ymp) GN=rpmB PE=3 SV=1 | |||||
| RL28_PSEPF |
135 | 9003 | |||
| 50S ribosomal protein L28 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rpmB PE=3 SV=1 | |||||
| RL28_PSEPW |
135 | 9094 | |||
| 50S ribosomal protein L28 OS=Pseudomonas putida (strain W619) GN=rpmB PE=3 SV=1 | |||||
| RL28_PSESM |
135 | 8987 | |||
| 50S ribosomal protein L28 OS=Pseudomonas syringae pv. tomato GN=rpmB PE=3 SV=1 | |||||
| RL28_PSEU2 |
135 | 8987 | |||
| 50S ribosomal protein L28 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpmB PE=3 SV=1 | |||||
| RL28_PSEU5 |
135 | 9060 | |||
| 50S ribosomal protein L28 OS=Pseudomonas stutzeri (strain A1501) GN=rpmB PE=3 SV=1 | |||||
| RL28_VIBSL |
49 | 9081 | 39.1 | ||
| 50S ribosomal protein L28 OS=Vibrio splendidus (strain LGP32) GN=rpmB PE=3 SV=1 | |||||
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DBHB_PSEAE | 148 | DNA-binding protein HU-beta OS=Pseudomonas aeruginosa GN=hupB PE=1 SV=3 |
Not what you expected? Try the select summary.
Mascot: http://www.matrixscience.com/