MASCOT Search ResultsMASCOT Search Results| User | : | Jennifer |
|---|---|---|
| : | [email protected] | |
| Search title | : | Rita1 sp |
| MS data file | : | PRT1270_T-BRSC_1_20250714114344.mgf |
| Database | : | SwissProt 57.15 (515,203 sequences; 181,334,896 residues) |
| Timestamp | : | 12 Aug 2025 at 22:50:29 GMT |
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| Type of search | : | MS/MS Ion Search |
|---|---|---|
| Enzyme | : | GluC_Trypsin |
| Fixed modifications | : | Carbamidomethyl (C) |
| Variable modifications | : | Deamidated (NQ), Oxidation (M) |
| Mass values | : | Monoisotopic |
| Protein mass | : | Unrestricted |
| Peptide mass tolerance | : | ± 20 ppm |
| Fragment mass tolerance | : | ± 0.1 Da |
| Max missed cleavages | : | 1 |
| Instrument type | : | ESI-FTICR |
| Number of queries | : | 4,938 |
Peptide score distribution. Ions score is −10log(P), where P is the probability that the observed match is a random event. Individual ions scores > 39 indicate identity or extensive homology (p<0.05).
[Deprecated] Score distribution for family members in the first 50 proteins. Protein scores are derived from ions scores as a non-probabilistic basis for ranking protein families.
| Dupes | Expect | Rank | U | 1 | 2 | Peptide | |
|---|---|---|---|---|---|---|---|
| 0.037 |  2 |
GAYSLSLR | significant | ||||
| 9 | 1 |
GFFLFVEGGR | top ranking | ||||
| 6.4e-005 | 1 |
GSSIFGLAPGK | significant and top ranking | ||||
| 1.3e-006 | 1 |
 |
SSGTSYPDVLK | peptide is found in all proteins in family member 1 | |||
| 6.2e-007 | 1 |
 |
VCNYVSWIK | peptide is found in some but not all proteins in family member 2 | |||
| 6.4e-005 | 1 |
U | GSSIFGLAPGK | unique | |||
| 2 |
5.7e-005 | 1 |
LNTLETEEWFFK | peptide has two duplicates | |||
| 0.18 | 1 |
LNTLETEEWFFK | duplicate peptide |
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31| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | OXAA_PSEPK | 175 | Inner membrane protein oxaA OS=Pseudomonas putida (strain KT2440) GN=oxaA PE=3 SV=1 |
32| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS3_PSEE4 | 173 | 30S ribosomal protein S3 OS=Pseudomonas entomophila (strain L48) GN=rpsC PE=3 SV=1 | |
| 2 | RS3_NITOC | 80 | 30S ribosomal protein S3 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rpsC PE=3 SV=1 | |
33| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | ODO1_AZOVI | 172 | 2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii GN=sucA PE=3 SV=1 |
34| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS11_PSEE4 | 169 | 30S ribosomal protein S11 OS=Pseudomonas entomophila (strain L48) GN=rpsK PE=3 SV=1 |
35| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RS9_PSEE4 | 161 | 30S ribosomal protein S9 OS=Pseudomonas entomophila (strain L48) GN=rpsI PE=3 SV=1 | |
| 2 | RS9_PSE14 | 90 | 30S ribosomal protein S9 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsI PE=3 SV=1 | |
36| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RISB_PSEPG | 159 | 6,7-dimethyl-8-ribityllumazine synthase OS=Pseudomonas putida (strain GB-1) GN=ribH PE=3 SV=1 |
37| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | CYOA_PSEPU | 155 | Ubiquinol oxidase subunit 2 OS=Pseudomonas putida GN=cyoA PE=3 SV=1 |
38| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | AROG_ECOLI | 155 | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive OS=Escherichia coli (strain K12) GN=aroG PE=1 SV=1 |
| Score | Mass | Matches | Sequences | emPAI | |||
|---|---|---|---|---|---|---|---|
| 38.1 | AROG_ECOLI |
155 | 38385 | 7 (4) | 6 (4) | 0.26 | |
| Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive OS=Escherichia coli (strain K12) GN=aroG PE=1 SV=1 | |||||||
| 1 sameset of AROG_ECOLI | |||||||
| AROG_ECO57 |
155 | 38385 | 7 (4) | 6 (4) | 0.26 | ||
| Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive OS=Escherichia coli O157:H7 GN=aroG PE=3 SV=1 | |||||||
7 peptide matches (7 non-duplicate, 0 duplicate)| Query | Dupes | Observed | Mr(expt) | Mr(calc) | ppm | M | Score | Expect | Rank | U | Peptide |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 452 |
346.1917 | 690.3688 | 690.3701 | -1.79 | 0 | 19 | 0.5 | 1Score > 40 indicates identity Score > 29 indicates homology |
R.TTVGWK.G | ||
| 560 |
372.2250 | 742.4354 | 742.4337 | 2.33 | 0 | 26 | 0.49 | 1Score > 42 indicates identity Score > 35 indicates homology |
U | R.QLANAVK.A | |
| 561 |
743.4428 | 742.4355 | 742.4337 | 2.44 | 0 | 43 | 0.043 | 1Score > 42 indicates identity |
U | R.QLANAVK.A | |
| 999 |
313.5089 | 937.5049 | 937.5021 | 2.92 | 1 | 24 | 0.15 | 1Score > 39 indicates identity Score > 28 indicates homology |
R.VYFEKPR.T | ||
| 2327 |
523.9320 | 1568.7742 | 1568.7695 | 2.96 | 1 | 84 | 1.4e-007 | 1Score > 41 indicates identity Score > 28 indicates homology |
U | K.FPATENAANTVAHAR.K | |
| 2973 |
624.9843 | 1871.9311 | 1871.9200 | 5.93 | 0 | 73 | 3.4e-007 | 1Score > 40 indicates identity Score > 20 indicates homology |
U | K.AGLPAQVMIDFSHANSSK.Q | |
| 3463 |
719.6849 | 2156.0329 | 2155.9957 | 17.3 | 0 | 34 | 0.00076 | 1Score > 39 indicates identity Score > 16 indicates homology |
U | K.GLINDPHMDNSFQINDGLR.I + Deamidated (NQ) |
39| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | RL28_PSEP1 | 150 | 50S ribosomal protein L28 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpmB PE=3 SV=1 |
40| Accession | Score | Description | ||
|---|---|---|---|---|
| 1 | DBHB_PSEAE | 148 | DNA-binding protein HU-beta OS=Pseudomonas aeruginosa GN=hupB PE=1 SV=3 |
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