Rita1 sp (Mascot Search Results)

Search metadata
User	:	Jennifer
E-mail	:	[email protected]
Search title	:	Rita1 sp
MS data file	:	PRT1270_T-BRSC_1_20250714114344.mgf
Database	:	SwissProt 57.15 (515,203 sequences; 181,334,896 residues)
Timestamp	:	12 Aug 2025 at 22:50:29 GMT

Search metadata

User

Jennifer

E-mail

[email protected]

Search title

Rita1 sp

MS data file

PRT1270_T-BRSC_1_20250714114344.mgf

Database

SwissProt 57.15 (515,203 sequences; 181,334,896 residues)

Timestamp

12 Aug 2025 at 22:50:29 GMT

Search parameters
Type of search	:	MS/MS Ion Search
Enzyme	:	GluC_Trypsin
Fixed modifications	:	Carbamidomethyl (C)
Variable modifications	:	Deamidated (NQ), Oxidation (M)
Mass values	:	Monoisotopic
Protein mass	:	Unrestricted
Peptide mass tolerance	:	± 20 ppm
Fragment mass tolerance	:	± 0.1 Da
Max missed cleavages	:	1
Instrument type	:	ESI-FTICR
Number of queries	:	4,938

Search parameters

Type of search

MS/MS Ion Search

Enzyme

GluC_Trypsin

Fixed modifications

Carbamidomethyl (C)

Variable modifications

Deamidated (NQ),

Oxidation (M)

Mass values

Monoisotopic

Protein mass

Unrestricted

Peptide mass tolerance

± 20 ppm

Fragment mass tolerance

± 0.1 Da

Max missed cleavages

Instrument type

ESI-FTICR

Number of queries

4,938

Legend
Dupes	Expect	Rank	U	Peptide
	0.037	2		GAYSLSLR	significant
	9	1		GFFLFVEGGR	top ranking
	6.4e-005	1		GSSIFGLAPGK	significant and top ranking
	1.3e-006	1		SSGTSYPDVLK	peptide is found in all proteins in family member 1
	6.2e-007	1		VCNYVSWIK	peptide is found in some but not all proteins in family member 2
	6.4e-005	1	U	GSSIFGLAPGK	unique
2	5.7e-005	1		LNTLETEEWFFK	peptide has two duplicates
	0.18	1		LNTLETEEWFFK	duplicate peptide

Legend

Dupes

Expect

Rank

Peptide

0.037

GAYSLSLR

significant

GFFLFVEGGR

top ranking

6.4e-005

GSSIFGLAPGK

significant and top ranking

1.3e-006

SSGTSYPDVLK

peptide is found in all proteins in family member 1

6.2e-007

VCNYVSWIK

peptide is found in some but not all proteins in family member 2

6.4e-005

GSSIFGLAPGK

unique

5.7e-005

LNTLETEEWFFK

peptide has two duplicates

0.18

LNTLETEEWFFK

duplicate peptide

Right-facing triangle (

) in the Dupes or Rank column indicates content that can be expanded by clicking on it. Down-facing triangle (

) indicates the content is expanded and can be collapsed. For more details about particular columns, see results format help.

Protein Family Summary

Protein families 21–30 (out of 230)

Previous 1 2 3 4 5 6 7 8 … 23 Next

21

		Accession	Score	Description
	1	ARPB_PSEPU	217	Antibiotic efflux pump membrane transporter arpB OS=Pseudomonas putida GN=arpB PE=2 SV=1

22

	Accession	Score	Description
1	RL5_PSEE4	215	50S ribosomal protein L5 OS=Pseudomonas entomophila (strain L48) GN=rplE PE=3 SV=1
2	RL5_FLAPJ	47	50S ribosomal protein L5 OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rplE PE=3 SV=1

23

		Accession	Score	Description
	1	RL11_PSEP1	215	50S ribosomal protein L11 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplK PE=3 SV=1

24

		Accession	Score	Description
	1	RPOA_PSEPK	211	DNA-directed RNA polymerase subunit alpha OS=Pseudomonas putida (strain KT2440) GN=rpoA PE=3 SV=1

25

		Accession	Score	Description
	1	RL1_PSEE4	210	50S ribosomal protein L1 OS=Pseudomonas entomophila (strain L48) GN=rplA PE=3 SV=1

26

		Accession	Score	Description
	1	RS20_PSE14	201	30S ribosomal protein S20 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsT PE=3 SV=1

27

		Accession	Score	Description
	1	ATPG_PSEPG	200	ATP synthase gamma chain OS=Pseudomonas putida (strain GB-1) GN=atpG PE=3 SV=1

28

		Accession	Score	Description
	1	ATPF_PSEPG	193	ATP synthase subunit b OS=Pseudomonas putida (strain GB-1) GN=atpF PE=3 SV=1

29

		Accession	Score	Description
	1	RL16_PSEP1	184	50S ribosomal protein L16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplP PE=3 SV=1

		Score	Mass	Matches	Sequences	emPAI
29.1	RL16_PSEP1	184	15364	12 (9)	5 (4)	1.37
	50S ribosomal protein L16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rplP PE=3 SV=1
	5 samesets of RL16_PSEP1
	RL16_PSEPG	184	15364	12 (9)	5 (4)	1.37
	50S ribosomal protein L16 OS=Pseudomonas putida (strain GB-1) GN=rplP PE=3 SV=1
	RL16_PSEPK	184	15364	12 (9)	5 (4)	1.37
	50S ribosomal protein L16 OS=Pseudomonas putida (strain KT2440) GN=rplP PE=3 SV=1
	RL16_PSEPW	184	15364	12 (9)	5 (4)	1.37
	50S ribosomal protein L16 OS=Pseudomonas putida (strain W619) GN=rplP PE=3 SV=1
	RL16_PSEE4	184	15364	12 (9)	5 (4)	1.37
	50S ribosomal protein L16 OS=Pseudomonas entomophila (strain L48) GN=rplP PE=3 SV=1
	RL16_PSEU5	184	15395	12 (9)	5 (4)	1.36
	50S ribosomal protein L16 OS=Pseudomonas stutzeri (strain A1501) GN=rplP PE=3 SV=1

12 peptide matches (9 non-duplicate, 3 duplicate)

7 subsets and intersections (49 subset proteins in total)

	Score	Mass	Subset of
RL16_PSE14	162	15421	29.1
50S ribosomal protein L16 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rplP PE=3 SV=1
5 samesets of RL16_PSE14
RL16_PSEF5	162	15407
50S ribosomal protein L16 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplP PE=3 SV=1
RL16_PSEFS	162	15422
50S ribosomal protein L16 OS=Pseudomonas fluorescens (strain SBW25) GN=rplP PE=3 SV=1
RL16_PSEPF	162	15407
50S ribosomal protein L16 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rplP PE=3 SV=1
RL16_PSESM	162	15421
50S ribosomal protein L16 OS=Pseudomonas syringae pv. tomato GN=rplP PE=3 SV=1
RL16_PSEU2	162	15421
50S ribosomal protein L16 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rplP PE=3 SV=1
RL16_PSEA7	134	15362	29.1
50S ribosomal protein L16 OS=Pseudomonas aeruginosa (strain PA7) GN=rplP PE=3 SV=1
3 samesets of RL16_PSEA7
RL16_PSEA8	134	15392
50S ribosomal protein L16 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplP PE=3 SV=1
RL16_PSEAB	134	15392
50S ribosomal protein L16 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplP PE=3 SV=1
RL16_PSEAE	134	15392
50S ribosomal protein L16 OS=Pseudomonas aeruginosa GN=rplP PE=3 SV=1
RL16_AZOVD	104	15445	29.1
50S ribosomal protein L16 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rplP PE=3 SV=1
1 sameset of RL16_AZOVD
RL16_PSEMY	104	15379
50S ribosomal protein L16 OS=Pseudomonas mendocina (strain ymp) GN=rplP PE=3 SV=1
RL16_MARMS	99	15574	29.1
50S ribosomal protein L16 OS=Marinomonas sp. (strain MWYL1) GN=rplP PE=3 SV=1
RL16_ACIB3	79	15514	29.1
50S ribosomal protein L16 OS=Acinetobacter baumannii (strain AB307-0294) GN=rplP PE=3 SV=1
28 samesets of RL16_ACIB3
RL16_SACD2	62	15613	29.1
50S ribosomal protein L16 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=rplP PE=3 SV=1
RL16_ALCBS	59	15426	29.1
50S ribosomal protein L16 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rplP PE=3 SV=1
5 samesets of RL16_ALCBS
RL16_CHRSD	59	15528
50S ribosomal protein L16 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=rplP PE=3 SV=1
RL16_LEGPA	59	15752
50S ribosomal protein L16 OS=Legionella pneumophila (strain Paris) GN=rplP PE=3 SV=1
RL16_LEGPC	59	15752
50S ribosomal protein L16 OS=Legionella pneumophila (strain Corby) GN=rplP PE=3 SV=1
RL16_LEGPH	59	15752
50S ribosomal protein L16 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rplP PE=3 SV=1
RL16_LEGPL	59	15752
50S ribosomal protein L16 OS=Legionella pneumophila (strain Lens) GN=rplP PE=3 SV=1

30

		Accession	Score	Description
	1	RS16_PSEP1	179	30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1

Previous 1 2 3 4 5 6 7 8 … 23 Next

Not what you expected? Try the select summary.

MASCOT Search Results

Score distribution

Protein Family Summary

Protein families 21–30 (out of 230)

21

22

23

24

25

26

27

28

29

12 peptide matches (9 non-duplicate, 3 duplicate)

7 subsets and intersections (49 subset proteins in total)

30